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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1928258 1928258 PRJNA681822_P_NODE_156182_length_337_cov_1.166667_g154694_i0 PRJNA681822 156182 337 1.166667 3.93166779 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 199 2.21e-58   NR PAA61376.1 282301 g154694 i0 86.5 8.89317507418398 111 15 98.8 0 3 335 223 333 PAA61376.1 hypothetical protein BOX15_Mlig032318g2 [Macrostomum lignano] diamond 2997 199 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
22330373 22330373 PRJNA681822_P_NODE_210438_length_302_cov_1.344978_g208950_i0 PRJNA681822 210438 302 1.344978 4.06183356 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 97.4 1.6400000000000001e-22   NR KAH9278277.1 6210 g208950 i0 68.1 4.12251655629139 69 22 68.5 0 95 301 52 120 KAH9278277.1 60S ribosomal protein L11 [Echinococcus granulosus] diamond 1245 97.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
27239942 27239942 PRJNA681822_P_NODE_142023_length_348_cov_1.120000_g140535_i0 PRJNA681822 142023 348 1.12 3.8976 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 63.2 8.98e-9   NR PAA82137.1 282301 g140535 i0 43.9 2.08620689655172 82 34 62.9 5 260 42 1815 1893 PAA82137.1 hypothetical protein BOX15_Mlig001770g5 [Macrostomum lignano] diamond 726 63.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27366753 27366753 PRJNA681822_P_NODE_324963_length_267_cov_2.067010_g323474_i0 PRJNA681822 324963 267 2.06701 5.5189167 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 127 6.480000000000001e-33   NR PAA79736.1 282301 g323474 i0 72.9 2.86516853932584 85 23 95.5 0 266 12 161 245 PAA79736.1 hypothetical protein BOX15_Mlig008239g2 [Macrostomum lignano] diamond 765 127 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27429926 27429926 PRJNA681822_P_NODE_487923_length_235_cov_2.549383_g486433_i0 PRJNA681822 487923 235 2.549383 5.99105005 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 64.7 1.48e-10   NR VDD84007.1 53468 g486433 i0 44.2 0.982978723404255 77 43 98.3 0 232 2 44 120 VDD84007.1 unnamed protein product [Mesocestoides corti] diamond 231 64.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
28345247 28345247 PRJNA681822_P_NODE_146786_length_344_cov_1.394834_g145298_i0 PRJNA681822 146786 344 1.394834 4.79822896 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 91.3 8.56e-19   NR CDS24484.1 6210 g145298 i0 44.9 1.90988372093023 118 56 95.1 1 327 1 253 370 CDS24484.1 annexin [Echinococcus granulosus] diamond 657 91.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
28483395 28483395 PRJNA681822_P_NODE_322366_length_268_cov_1.579487_g320877_i0 PRJNA681822 322366 268 1.579487 4.23302516 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.1 6.92e-10   NR PAA74800.1 282301 g320877 i0 41.5 8.19402985074627 82 40 88.4 2 250 14 165 241 PAA74800.1 hypothetical protein BOX15_Mlig032341g2 [Macrostomum lignano] diamond 2196 65.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28641383 28641383 PRJNA681822_P_NODE_333007_length_265_cov_1.604167_g331518_i0 PRJNA681822 333007 265 1.604167 4.25104255 root 1 Root_unresolved Root_unresolved 56.2 7.69e-7   NR VEL10827.1 117903 g331518 i0 82.8 5.30943396226415 29 5 32.8 0 24 110 302 330 VEL10827.1 unnamed protein product [Protopolystoma xenopodis] diamond 1407 56.6 0.992932862190813 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis
29556705 29556705 PRJNA681822_P_NODE_339590_length_263_cov_1.963158_g338101_i0 PRJNA681822 339590 263 1.963158 5.16310554 root 1 Root_unresolved Root_unresolved 42.7 0.0246   NR VDM04664.1 70667 g338101 i0 39.7 1.12927756653992 68 37 74.1 2 223 29 5 71 VDM04664.1 unnamed protein product [Schistocephalus solidus] diamond 297 42.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus
29999108 29999108 PRJNA681822_P_NODE_476571_length_241_cov_1.827381_g475081_i0 PRJNA681822 476571 241 1.827381 4.40398821 Opisthokonta 33154 Platyhelminthes Platyhelminthes 52.4 1.33e-5   NR XP_018646892.1 6183 g475081 i0 39.3 7.59336099585062 61 37 75.9 0 185 3 22 82 XP_018646892.1 protein kiaa0174, putative [Schistosoma mansoni] diamond 1830 52.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
31567633 31567633 PRJNA681822_P_NODE_361816_length_257_cov_1.489130_g360327_i0 PRJNA681822 361816 257 1.48913 3.8270641 Hymenolepis diminuta 6216 Platyhelminthes Platyhelminthes 100 1.8000000000000001e-22   NR VUZ39870.1 6216 g360327 i0 63.2 0.88715953307393 76 28 88.7 0 26 253 4 79 VUZ39870.1 unnamed protein product [Hymenolepis diminuta] diamond 228 100 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
31895435 31895435 PRJNA681822_P_NODE_448937_length_244_cov_1.695906_g447447_i0 PRJNA681822 448937 244 1.695906 4.13801064 Metazoa 33208 Platyhelminthes Platyhelminthes 89 2.99e-19   NR CAX72420.1 6182 g447447 i0 60.8 9.72540983606557 79 31 97.1 0 244 8 187 265 CAX72420.1 polyubiquitin [Schistosoma japonicum] diamond 2373 89.4 0.995525727069351 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;