RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_phylum = "Pisuviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA681822 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29765951 29765951 PRJNA681822_P_NODE_130571_length_358_cov_1.210526_g129084_i0 PRJNA681822 130571 358 1.210526 4.33368308 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 80.5 8.18e-15   NR XCM68108.1 3003959 g129084 i0 43 0.720670391061452 86 49 72.1 0 260 3 60 145 XCM68108.1 MAG: structural polyprotein [Picornavirales sp.] diamond 258 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
30998342 30998342 PRJNA681822_P_NODE_395354_length_250_cov_0.870056_g393865_i0 PRJNA681822 395354 250 0.870056 2.17514 Taiwan douglas-fir deltapartitivirus 2933092 Viruses Viruses 105 2.2799999999999998e-24   NR CAI5384001.1 2933092 g393865 i0 61.4 0.996 83 31 99.6 1 2 250 114 195 CAI5384001.1 RNA-dependent RNA polymerase [Taiwan douglas-fir deltapartitivirus] diamond 249 105 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Deltapartitivirus Taiwan douglas-fir deltapartitivirus
32389945 32389945 PRJNA681822_P_NODE_342859_length_262_cov_2.169312_g341370_i0 PRJNA681822 342859 262 2.169312 5.68359744 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 156 4.02e-42   NR XCM68434.1 3003959 g341370 i0 80 0.973282442748092 85 17 97.3 0 260 6 594 678 XCM68434.1 MAG: structural polyprotein [Picornavirales sp.] diamond 255 156 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;