RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA681822 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27619223 27619223 PRJNA681822_P_NODE_5684_length_1582_cov_4.996024_g5009_i0 PRJNA681822 5684 1582 4.996024 79.03709968 Qingdao RNA virus 4 2979708 Viruses Viruses 337 2.959999999999999e-105   NR BDR95914.1 2979708 g5009 i0 47.7 1.2629582806574 333 174 63.1 0 1582 584 264 596 BDR95914.1 hypothetical protein [Qingdao RNA virus 4] diamond 1998 337 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4
29639515 29639515 PRJNA681822_P_NODE_23490_length_783_cov_2.783099_g22212_i0 PRJNA681822 23490 783 2.783099 21.79166517 Qingdao RNA virus 4 2979708 Viruses Viruses 164 5.299999999999999e-43   NR BDR95914.1 2979708 g22212 i0 39.8 0.885057471264368 231 137 88.5 1 698 6 3 231 BDR95914.1 hypothetical protein [Qingdao RNA virus 4] diamond 693 164 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4
32105099 32105099 PRJNA681822_P_NODE_109178_length_380_cov_1.374593_g107692_i0 PRJNA681822 109178 380 1.374593 5.2234534 Qingdao RNA virus 4 2979708 Viruses Viruses 157 1.7e-41   NR BDR95913.1 2979708 g107692 i0 63.5 0.994736842105263 126 46 99.5 0 1 378 1360 1485 BDR95913.1 RNA-dependent RNA polymerase [Qingdao RNA virus 4] diamond 378 157 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4
32548361 32548361 PRJNA681822_P_NODE_213219_length_300_cov_2.268722_g211731_i0 PRJNA681822 213219 300 2.268722 6.806166 Qingdao RNA virus 4 2979708 Viruses Viruses 64.3 2.05e-9   NR BDR95913.1 2979708 g211731 i0 33.7 1.04 104 63 98 1 1 294 1685 1788 BDR95913.1 RNA-dependent RNA polymerase [Qingdao RNA virus 4] diamond 312 64.3 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   Qingdao RNA virus 4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;