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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_phylum = "Gemmatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 25 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3722463 3722463 PRJNA681822_P_NODE_384243_length_251_cov_0.865169_g382754_i0 PRJNA681822 384243 251 0.865169 2.17157419 Longimicrobium sp. 2029185 Bacteria Bacteria 143 1.4099999999999999e-40   NR HYR10054.1 2029185 g382754 i0 85.7 1.00398406374502 84 11 99.2 1 2 250 8 91 HYR10054.1 DDE-type integrase/transposase/recombinase [Longimicrobium sp.] diamond 252 143 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
7032164 7032164 PRJNA681822_P_NODE_256466_length_285_cov_1.292453_g254977_i0 PRJNA681822 256466 285 1.292453 3.68349105 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 135 2.2099999999999993e-34   NR MBA3892972.1 2448054 g254977 i0 72.3 3.95789473684211 94 23 98.9 1 284 3 475 565 MBA3892972.1 response regulator [Gemmatimonadales bacterium] diamond 1128 135 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
8307431 8307431 PRJNA681822_P_NODE_310207_length_271_cov_2.065657_g308718_i0 PRJNA681822 310207 271 2.065657 5.59793047 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 186 7.060000000000001e-58   NR HET9514801.1 2448054 g308718 i0 100 0.996309963099631 90 0 99.6 0 271 2 110 199 HET9514801.1 hypothetical protein [Gemmatimonadales bacterium] diamond 270 186 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
9584288 9584288 PRJNA681822_P_NODE_441448_length_245_cov_0.895349_g439959_i0 PRJNA681822 441448 245 0.895349 2.19360505 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 62.8 3.09e-9   NR PYP53864.1 2026742 g439959 i0 63.6 0.538775510204082 44 15 53.9 1 237 106 223 265 PYP53864.1 MAG: hypothetical protein DMD45_00580 [Gemmatimonadota bacterium] diamond 132 62.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
12136032 12136032 PRJNA681822_P_NODE_56550_length_496_cov_2.094563_g55082_i0 PRJNA681822 56550 496 2.094563 10.38903248 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 320 6.79e-100   NR MEE8596102.1 2026742 g55082 i0 100 0.991935483870968 164 0 99.2 0 494 3 254 417 MEE8596102.1 amino acid adenylation domain-containing protein [Gemmatimonadota bacterium] diamond 492 320 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
21054834 21054834 PRJNA681822_P_NODE_16097_length_950_cov_1.670468_g14984_i0 PRJNA681822 16097 950 1.670468 15.869446 Pseudomonadati 3379134 Bacteria Bacteria 309 3.449999999999999e-99   NR HEU5170203.1 2448054 g14984 i0 68.4 2.60210526315789 212 66 66.9 1 949 314 243 453 HEU5170203.1 acetyl ornithine aminotransferase family protein [Gemmatimonadales bacterium] diamond 2472 311 0.993569131832797 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
23609021 23609021 PRJNA681822_P_NODE_464679_length_243_cov_0.905882_g463189_i0 PRJNA681822 464679 243 0.905882 2.20129326 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 133 5.79e-34   NR MDX2260556.1 2448054 g463189 i0 76.3 1.97530864197531 80 19 98.8 0 2 241 485 564 MDX2260556.1 carbamoyl-phosphate synthase large subunit [Gemmatimonadales bacterium] diamond 480 133 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
26765527 26765527 PRJNA681822_P_NODE_329161_length_266_cov_1.595855_g327672_i0 PRJNA681822 329161 266 1.595855 4.2449743 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 171 2.6299999999999996e-47   NR MEE8596102.1 2026742 g327672 i0 100 0.992481203007519 88 0 99.2 0 264 1 154 241 MEE8596102.1 amino acid adenylation domain-containing protein [Gemmatimonadota bacterium] diamond 264 171 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
26797186 26797186 PRJNA681822_P_NODE_410081_length_248_cov_1.754286_g408592_i0 PRJNA681822 410081 248 1.754286 4.35062928 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 144 1.66e-42   NR HET9387417.1 2448054 g408592 i0 81.7 0.991935483870968 82 15 99.2 0 1 246 21 102 HET9387417.1 DinB family protein [Gemmatimonadales bacterium] diamond 246 144 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
26840869 26840869 PRJNA681822_P_NODE_447161_length_244_cov_3.602339_g445671_i0 PRJNA681822 447161 244 3.602339 8.78970716 Pseudomonadati 3379134 Bacteria Bacteria 67.4 7.93e-11   NR MEJ7760449.1 2026741 g445671 i0 46.9 2.86475409836066 81 41 97.1 1 2 238 17 97 MEJ7760449.1 SusC/RagA family TonB-linked outer membrane protein [Gemmatimonadaceae bacterium] diamond 699 67.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
27871625 27871625 PRJNA681822_P_NODE_242545_length_288_cov_1.432558_g241056_i0 PRJNA681822 242545 288 1.432558 4.12576704 Longimicrobiales bacterium 2910168 Bacteria Bacteria 114 5.079999999999999e-31   NR HEX7117863.1 2910168 g241056 i0 61.4 6.01041666666667 83 32 86.5 0 253 5 1 83 HEX7117863.1 ATP synthase F1 subunit epsilon [Longimicrobiales bacterium] diamond 1731 114 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
28187174 28187174 PRJNA681822_P_NODE_252826_length_286_cov_1.150235_g251337_i0 PRJNA681822 252826 286 1.150235 3.2896721 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 44.3 0.0173   NR MEI2718846.1 2448054 g251337 i0 57.5 0.41958041958042 40 17 42 0 244 125 362 401 MEI2718846.1 ATP-binding cassette domain-containing protein [Gemmatimonadales bacterium] diamond 120 44.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
28661135 28661135 PRJNA681822_P_NODE_395747_length_250_cov_0.870056_g394258_i0 PRJNA681822 395747 250 0.870056 2.17514 Longimicrobium sp. 2029185 Bacteria Bacteria 137 1.68e-38   NR HEX9939174.1 2029185 g394258 i0 85.9 1.884 78 11 93.6 0 249 16 120 197 HEX9939174.1 alpha/beta fold hydrolase [Longimicrobium sp.] diamond 471 137 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
28881957 28881957 PRJNA681822_P_NODE_388528_length_251_cov_0.865169_g387039_i0 PRJNA681822 388528 251 0.865169 2.17157419 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 92.8 1.58e-21   NR HKP15078.1 2026741 g387039 i0 58.3 4.9601593625498 84 32 99.2 2 3 251 49 130 HKP15078.1 GNAT family N-acetyltransferase [Gemmatimonadaceae bacterium] diamond 1245 92.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
29008681 29008681 PRJNA681822_P_NODE_315028_length_270_cov_1.563452_g313539_i0 PRJNA681822 315028 270 1.563452 4.2213204 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 109 1.39e-25   NR HEY4320290.1 2448054 g313539 i0 63.6 0.977777777777778 88 32 97.8 0 264 1 196 283 HEY4320290.1 DNA ligase D [Gemmatimonadales bacterium] diamond 264 109 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
29702595 29702595 PRJNA681822_P_NODE_460090_length_243_cov_0.905882_g458600_i0 PRJNA681822 460090 243 0.905882 2.20129326 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 113 9.76e-30   NR HEU0077616.1 3047548 g458600 i0 67.5 0.987654320987654 80 26 98.8 0 3 242 52 131 HEU0077616.1 hypothetical protein [Longimicrobiaceae bacterium] diamond 240 113 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
29797554 29797554 PRJNA681822_P_NODE_248751_length_287_cov_1.102804_g247262_i0 PRJNA681822 248751 287 1.102804 3.16504748 Longimicrobiales bacterium 2910168 Bacteria Bacteria 96.7 7.27e-22   NR HSK21375.1 2910168 g247262 i0 62.1 2.90592334494774 95 36 99.3 0 287 3 150 244 HSK21375.1 tetratricopeptide repeat protein [Longimicrobiales bacterium] diamond 834 96.7 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
30347048 30347048 PRJNA681822_P_NODE_333032_length_265_cov_1.604167_g331543_i0 PRJNA681822 333032 265 1.604167 4.25104255 Bacteria 2 Bacteria Bacteria 56.6 5.58e-7   NR HEX5832177.1 2026741 g331543 i0 63.8 1.66415094339623 47 16 53.2 1 265 125 266 311 HEX5832177.1 formate dehydrogenase accessory sulfurtransferase FdhD [Gemmatimonadaceae bacterium] diamond 441 56.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30713885 30713885 PRJNA681822_P_NODE_488374_length_234_cov_2.832298_g486884_i0 PRJNA681822 488374 234 2.832298 6.62757732 Gemmatirosa sp. 2510638 Bacteria Bacteria 79.3 4.26e-15   NR HZF69192.1 2510638 g486884 i0 89.1 0.58974358974359 46 5 59 0 232 95 214 259 HZF69192.1 response regulator [Gemmatirosa sp.] diamond 138 79.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa sp.
30935195 30935195 PRJNA681822_P_NODE_416814_length_248_cov_0.880000_g415325_i0 PRJNA681822 416814 248 0.88 2.1824 Longimicrobiaceae bacterium 3047548 Bacteria Bacteria 103 2.19e-23   NR MET0396662.1 3047548 g415325 i0 65 1.92338709677419 80 27 96.8 1 5 244 525 603 MET0396662.1 amino acid adenylation domain-containing protein [Longimicrobiaceae bacterium] diamond 477 103 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae   Longimicrobiaceae bacterium
31009992 31009992 PRJNA681822_P_NODE_358974_length_258_cov_1.248649_g357485_i0 PRJNA681822 358974 258 1.248649 3.22151442 Bacteria 2 Bacteria Bacteria 108 8.43e-26   NR HKG93306.1 2026741 g357485 i0 70 9.59302325581395 80 24 93 0 6 245 291 370 HKG93306.1 trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase [Gemmatimonadaceae bacterium] diamond 2475 109 0.990825688073395 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31061756 31061756 PRJNA681822_P_NODE_437815_length_245_cov_2.529070_g436326_i0 PRJNA681822 437815 245 2.52907 6.1962215 Longimicrobiales bacterium 2910168 Bacteria Bacteria 43.9 0.015   NR HUF76180.1 2910168 g436326 i0 32.1 0.955102040816327 78 50 91.8 1 244 20 188 265 HUF76180.1 TonB-dependent receptor [Longimicrobiales bacterium] diamond 234 43.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales     Longimicrobiales bacterium
31630588 31630588 PRJNA681822_P_NODE_330676_length_266_cov_1.290155_g329187_i0 PRJNA681822 330676 266 1.290155 3.4318123 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 176 1.96e-51   NR HSJ76591.1 2448054 g329187 i0 94.3 0.992481203007519 88 5 99.2 0 1 264 103 190 HSJ76591.1 IS701 family transposase [Gemmatimonadales bacterium] diamond 264 176 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
31788548 31788548 PRJNA681822_P_NODE_267337_length_282_cov_1.473684_g265848_i0 PRJNA681822 267337 282 1.473684 4.15578888 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 146 6.42e-40   NR MBY0489852.1 2026741 g265848 i0 70.2 1 94 28 100 0 1 282 89 182 MBY0489852.1 sterol desaturase family protein [Gemmatimonadaceae bacterium] diamond 282 146 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32768525 32768525 PRJNA681822_P_NODE_247060_length_287_cov_1.439252_g245571_i0 PRJNA681822 247060 287 1.439252 4.13065324 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 79.3 2.4e-15   NR HKH93424.1 2026741 g245571 i0 47 1.78745644599303 83 44 86.8 0 250 2 57 139 HKH93424.1 FkbM family methyltransferase [Gemmatimonadaceae bacterium] diamond 513 79.3 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;