RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27082034 27082034 PRJNA681822_P_NODE_494642_length_200_cov_4.929134_g493152_i0 PRJNA681822 494642 200 4.929134 9.858268 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 46.6 9.21e-4   NR MES1906811.1 1215613 g493152 i0 55.9 0.51 34 15 51 0 122 21 314 347 MES1906811.1 hypothetical protein [Cercozoa sp. M6MM] diamond 102 46.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
29260739 29260739 PRJNA681822_P_NODE_280829_length_279_cov_1.368932_g279340_i0 PRJNA681822 280829 279 1.368932 3.81932028 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 130 2.71e-33   NR MES1909640.1 1215613 g279340 i0 67.7 2.97849462365591 93 29 98.9 1 278 3 272 364 MES1909640.1 hypothetical protein [Cercozoa sp. M6MM] diamond 831 130 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32528461 32528461 PRJNA681822_P_NODE_451319_length_244_cov_0.900585_g449829_i0 PRJNA681822 451319 244 0.900585 2.1974274 Viridiplantae 33090 SAR_Eukaryotes SAR_Eukaryotes 122 8.47e-32   NR MES1911029.1 1215613 g449829 i0 77.5 5.96311475409836 80 18 98.4 0 243 4 90 169 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 1455 122 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32863064 32863064 PRJNA681822_P_NODE_255180_length_285_cov_1.452830_g253691_i0 PRJNA681822 255180 285 1.45283 4.1405655 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 84 1.84e-17   NR MES1908571.1 1215613 g253691 i0 61.3 0.842105263157895 80 31 84.2 0 7 246 140 219 MES1908571.1 hypothetical protein [Cercozoa sp. M6MM] diamond 240 84 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;