RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA681822" and tax_clade = "Stenosarchaea group"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 31 ✖

bioproject 1

  • PRJNA681822 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4482954 4482954 PRJNA681822_P_NODE_380804_length_251_cov_1.730337_g379315_i0 PRJNA681822 380804 251 1.730337 4.34314587 Halalkalicoccus 332246 Archaea Archaea 149 3.49e-40   NR WP_013199520.1 413810 g379315 i0 89.2 2.97609561752988 83 9 99.2 0 1 249 183 265 WP_013199520.1 DNA polymerase/3'-5' exonuclease PolX [Halalkalicoccus jeotgali] diamond 747 150 0.993333333333333 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
9582549 9582549 PRJNA681822_P_NODE_296868_length_275_cov_1.316832_g295379_i0 PRJNA681822 296868 275 1.316832 3.621288 Halalkalicoccus 332246 Archaea Archaea 142 1.49e-39   NR WP_340605011.1 175632 g295379 i0 88.1 4.38545454545455 67 8 73.1 0 74 274 1 67 WP_340605011.1 MBL fold metallo-hydrolase [Halalkalicoccus tibetensis] diamond 1206 143 0.993006993006993 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
10858578 10858578 PRJNA681822_P_NODE_348409_length_261_cov_1.335106_g346920_i0 PRJNA681822 348409 261 1.335106 3.48462666 Halalkalicoccus paucihalophilus 1008153 Archaea Archaea 168 5.49e-51   NR WP_066379761.1 1008153 g346920 i0 93 0.988505747126437 86 6 98.9 0 2 259 104 189 WP_066379761.1 PspA-associated protein PspAB [Halalkalicoccus paucihalophilus] diamond 258 168 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus paucihalophilus
23608887 23608887 PRJNA681822_P_NODE_454759_length_244_cov_0.900585_g453269_i0 PRJNA681822 454759 244 0.900585 2.1974274 Halalkalicoccus sp. 1973143 Archaea Archaea 98.6 4.73e-22   NR MEM4780179.1 1973143 g453269 i0 84.5 0.713114754098361 58 9 71.3 0 2 175 373 430 MEM4780179.1 TraB/GumN family protein [Halalkalicoccus sp.] diamond 174 98.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
24882330 24882330 PRJNA681822_P_NODE_468100_length_242_cov_1.520710_g466610_i0 PRJNA681822 468100 242 1.52071 3.6801182 Halostagnicola kamekurae 619731 Archaea Archaea 58.5 8.64e-8   NR WP_092906997.1 619731 g466610 i0 67.6 1.94628099173554 37 12 45.9 0 32 142 274 310 WP_092906997.1 mannonate dehydratase [Halostagnicola kamekurae] diamond 471 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halostagnicola Halostagnicola kamekurae
26682163 26682163 PRJNA681822_P_NODE_233541_length_290_cov_1.626728_g232052_i0 PRJNA681822 233541 290 1.626728 4.7175112 Halobacteriales 2235 Archaea Archaea 114 5.57e-30   NR WP_191453082.1 2668071 g232052 i0 64.1 3.80689655172414 92 33 95.2 0 278 3 1 92 WP_191453082.1 type VII toxin-antitoxin system MntA family adenylyltransferase antitoxin [Halogeometricum sp. CBA1124] diamond 1104 115 0.991304347826087 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halogeometricum Halogeometricum sp. CBA1124
26829005 26829005 PRJNA681822_P_NODE_422521_length_247_cov_0.885057_g421032_i0 PRJNA681822 422521 247 0.885057 2.18609079 Natrarchaeobius chitinivorans 1679083 Archaea Archaea 154 2.4999999999999997e-44   NR WP_124193444.1 1679083 g421032 i0 92.7 4.97975708502024 82 6 99.6 0 2 247 6 87 WP_124193444.1 NAD-dependent epimerase/dehydratase family protein [Natrarchaeobius chitinivorans] diamond 1230 154 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobius Natrarchaeobius chitinivorans
27429906 27429906 PRJNA681822_P_NODE_377783_length_252_cov_1.687151_g376294_i0 PRJNA681822 377783 252 1.687151 4.25162052 Halalkalicoccus 332246 Archaea Archaea 152 1.21e-45   NR WP_332099232.1 332246 g376294 i0 89.5 0.904761904761905 76 8 90.5 0 251 24 52 127 WP_332099232.1 MULTISPECIES: DUF2237 family protein [Halalkalicoccus] diamond 228 152 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus  
27461352 27461352 PRJNA681822_P_NODE_228523_length_292_cov_1.762557_g227034_i0 PRJNA681822 228523 292 1.762557 5.14666644 Halalkalicoccus sp. NIPERK 1973143 Archaea Archaea 149 1.8799999999999994e-42   NR WP_286045129.1 3053469 g227034 i0 75.6 1.76712328767123 86 21 88.4 0 2 259 165 250 WP_286045129.1 PHP-associated domain-containing protein [Halalkalicoccus sp. NIPERK01] diamond 516 149 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp. NIPERK01
27524372 27524372 PRJNA681822_P_NODE_263263_length_283_cov_1.466667_g261774_i0 PRJNA681822 263263 283 1.466667 4.15066761 Halobellus sp. Atlit-38R 2282131 Archaea Archaea 62.8 5.21e-9   NR WP_121571303.1 2282131 g261774 i0 57.1 1.00706713780919 49 21 51.9 0 220 74 383 431 WP_121571303.1 IS4 family transposase [Halobellus sp. Atlit-38R] diamond 285 62.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus sp. Atlit-38R
27587643 27587643 PRJNA681822_P_NODE_438724_length_245_cov_1.790698_g437235_i0 PRJNA681822 438724 245 1.790698 4.3872101 Halalkalicoccus sp. 1973143 Archaea Archaea 122 1.88e-30   NR MCL7418724.1 1973143 g437235 i0 84.9 1.78775510204082 73 11 89.4 0 221 3 394 466 MCL7418724.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Halalkalicoccus sp.] diamond 438 122 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
28061041 28061041 PRJNA681822_P_NODE_315985_length_270_cov_1.335025_g314496_i0 PRJNA681822 315985 270 1.335025 3.6045675 Halalkalicoccus sp. 1973143 Archaea Archaea 88.2 2.58e-18   NR MEM4781010.1 1973143 g314496 i0 48.8 1.77777777777778 80 41 88.9 0 269 30 28 107 MEM4781010.1 DoxX family membrane protein [Halalkalicoccus sp.] diamond 480 88.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
28293766 28293766 PRJNA681822_P_NODE_183286_length_318_cov_1.767347_g181798_i0 PRJNA681822 183286 318 1.767347 5.62016346 root 1 Root_unresolved Root_unresolved 116 1.66e-29   NR MCX9083893.1 2032688 g181798 i0 48.5 7.80188679245283 103 53 97.2 0 6 314 46 148 MCX9083893.1 response regulator [Candidatus Methanoperedens sp.] diamond 2481 117 0.991452991452991 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
28313835 28313835 PRJNA681822_P_NODE_72846_length_442_cov_2.189702_g71368_i0 PRJNA681822 72846 442 2.189702 9.67848284 Natribaculum luteum 1586232 Archaea Archaea 109 2.81e-26   NR WP_246966917.1 1586232 g71368 i0 58.1 0.631221719457014 93 38 63.1 1 14 292 159 250 WP_246966917.1 hypothetical protein [Natribaculum luteum] diamond 279 109 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natribaculum Natribaculum luteum
28578105 28578105 PRJNA681822_P_NODE_307887_length_272_cov_1.502513_g306398_i0 PRJNA681822 307887 272 1.502513 4.08683536 Halalkalicoccus 332246 Archaea Archaea 173 5.37e-53   NR MEM4781189.1 1973143 g306398 i0 88.9 3.97058823529412 90 10 99.3 0 2 271 94 183 MEM4781189.1 NAD(P)H-dependent oxidoreductase [Halalkalicoccus sp.] diamond 1080 173 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
28629658 28629658 PRJNA681822_P_NODE_250287_length_286_cov_1.845070_g248798_i0 PRJNA681822 250287 286 1.84507 5.2769002 Halalkalicoccus 332246 Archaea Archaea 151 1.76e-41   NR WP_332098169.1 332246 g248798 i0 83.7 0.965034965034965 92 15 96.5 0 285 10 356 447 WP_332098169.1 MULTISPECIES: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Halalkalicoccus] diamond 276 151 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus  
28672884 28672884 PRJNA681822_P_NODE_484887_length_240_cov_2.197605_g483397_i0 PRJNA681822 484887 240 2.197605 5.274252 Halalkalicoccus 332246 Archaea Archaea 52.8 2.14e-6   NR WP_340605309.1 175632 g483397 i0 74.2 0.775 31 8 38.8 0 94 2 17 47 WP_340605309.1 hypothetical protein [Halalkalicoccus tibetensis] diamond 186 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
29040141 29040141 PRJNA681822_P_NODE_307628_length_272_cov_1.547739_g306139_i0 PRJNA681822 307628 272 1.547739 4.20985008 Halalkalicoccus tibetensis 175632 Archaea Archaea 66.2 2.78e-10   NR WP_340605345.1 175632 g306139 i0 100 1.19117647058824 32 0 35.3 0 177 272 1 32 WP_340605345.1 hypothetical protein [Halalkalicoccus tibetensis] diamond 324 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
29544984 29544984 PRJNA681822_P_NODE_441910_length_245_cov_0.895349_g440421_i0 PRJNA681822 441910 245 0.895349 2.19360505 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 94.4 2.77e-22   NR MCZ7357909.1 2032688 g440421 i0 51.3 0.955102040816327 78 37 95.5 1 3 236 17 93 MCZ7357909.1 CPBP family intramembrane metalloprotease [Candidatus Methanoperedens sp.] diamond 234 94.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29967444 29967444 PRJNA681822_P_NODE_373011_length_253_cov_3.005556_g371522_i0 PRJNA681822 373011 253 3.005556 7.60405668 Halostagnicola 353799 Archaea Archaea 115 4.9199999999999993e-29   NR PSP92919.1 1919173 g371522 i0 74.1 2.89328063241107 81 21 96 0 3 245 33 113 PSP92919.1 MAG: 4-hydroxybenzoate polyprenyltransferase [Halobacteriales archaeon QS_4_62_28] diamond 732 115 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QS_4_62_28
30335214 30335214 PRJNA681822_P_NODE_456292_length_244_cov_0.894737_g454802_i0 PRJNA681822 456292 244 0.894737 2.18315828 Halorubellus salinus 755309 Archaea Archaea 43.1 0.0274   NR WP_227131871.1 755309 g454802 i0 36.5 0.774590163934426 63 38 75 2 29 211 394 456 WP_227131871.1 MATE family efflux transporter [Halorubellus salinus] diamond 189 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halorubellaceae Halorubellus Halorubellus salinus
30757284 30757284 PRJNA681822_P_NODE_364454_length_256_cov_1.683060_g362965_i0 PRJNA681822 364454 256 1.68306 4.3086336 Halalkalicoccus 332246 Archaea Archaea 169 5.23e-50   NR MEM4780165.1 1973143 g362965 i0 91.8 1.9921875 85 7 99.6 0 2 256 115 199 MEM4780165.1 NAD(P)-dependent oxidoreductase [Halalkalicoccus sp.] diamond 510 170 0.994117647058824 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
30840306 30840306 PRJNA681822_P_NODE_322234_length_268_cov_1.579487_g320745_i0 PRJNA681822 322234 268 1.579487 4.23302516 Halalkalicoccus salilacus 3117459 Archaea Archaea 119 1.4799999999999998e-31   NR WP_336365189.1 3117459 g320745 i0 91.9 0.694029850746269 62 5 69.4 0 264 79 152 213 WP_336365189.1 tyrosine-type recombinase/integrase [Halalkalicoccus salilacus] diamond 186 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
30915381 30915381 PRJNA681822_P_NODE_362194_length_257_cov_1.320652_g360705_i0 PRJNA681822 362194 257 1.320652 3.39407564 Halobacteriales 2235 Archaea Archaea 47 6.6e-5   NR AFO58545.1 406552 g360705 i0 69.6 0.922178988326848 23 7 26.8 0 53 121 9 31 AFO58545.1 hypothetical protein NJ7G_3327 [Natrinema sp. J7-2] diamond 237 47.4 0.991561181434599 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema sp. J7-2
31124284 31124284 PRJNA681822_P_NODE_254335_length_285_cov_1.962264_g252846_i0 PRJNA681822 254335 285 1.962264 5.5924524 Salinigranum rubrum 755307 Archaea Archaea 112 2.33e-28   NR WP_103428222.1 755307 g252846 i0 86.9 0.642105263157895 61 8 64.2 0 285 103 123 183 WP_103428222.1 IS6 family transposase [Salinigranum rubrum] diamond 183 112 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinigranum Salinigranum rubrum
31124286 31124286 PRJNA681822_P_NODE_256755_length_285_cov_1.216981_g255266_i0 PRJNA681822 256755 285 1.216981 3.46839585 Halalkalicoccus sp. 1973143 Archaea Archaea 121 4.26e-30   NR MEM4782541.1 1973143 g255266 i0 68.5 0.968421052631579 92 29 96.8 0 277 2 206 297 MEM4782541.1 O-antigen ligase family protein [Halalkalicoccus sp.] diamond 276 121 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
31314327 31314327 PRJNA681822_P_NODE_314835_length_270_cov_1.563452_g313346_i0 PRJNA681822 314835 270 1.563452 4.2213204 Halalkalicoccus 332246 Archaea Archaea 148 1.0499999999999998e-41   NR WP_332100029.1 332246 g313346 i0 80.9 5.93333333333333 89 17 98.9 0 2 268 91 179 WP_332100029.1 MULTISPECIES: dihydrodipicolinate synthase family protein [Halalkalicoccus] diamond 1602 148 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus  
31535991 31535991 PRJNA681822_P_NODE_470056_length_242_cov_0.911243_g468566_i0 PRJNA681822 470056 242 0.911243 2.20520806 Halalkalicoccus sp. 1973143 Archaea Archaea 99.8 3.25e-22   NR MEM4780097.1 1973143 g468566 i0 69.7 0.942148760330578 76 21 94.2 1 14 241 16 89 MEM4780097.1 S8 family serine peptidase [Halalkalicoccus sp.] diamond 228 99.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.
31630574 31630574 PRJNA681822_P_NODE_200716_length_308_cov_1.310638_g199228_i0 PRJNA681822 200716 308 1.310638 4.03676504 Halalkalicoccus salilacus 3117459 Archaea Archaea 132 1.7999999999999998e-33   NR WP_336364887.1 3117459 g199228 i0 67.6 0.993506493506494 102 30 99.4 1 1 306 139 237 WP_336364887.1 hypothetical protein [Halalkalicoccus salilacus] diamond 306 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus salilacus
32327080 32327080 PRJNA681822_P_NODE_94919_length_399_cov_1.800613_g93437_i0 PRJNA681822 94919 399 1.800613 7.18444587 Natrialbaceae archaeon AArc-T1-2 3053904 Archaea Archaea 119 2.8799999999999997e-30   NR WP_285927817.1 3053904 g93437 i0 50 0.81203007518797 108 54 81.2 0 339 16 125 232 WP_285927817.1 DUF547 domain-containing protein [Natrialbaceae archaeon AArc-T1-2] diamond 324 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrarchaeobaculum Natrialbaceae archaeon AArc-T1-2
32485053 32485053 PRJNA681822_P_NODE_470659_length_242_cov_0.911243_g469169_i0 PRJNA681822 470659 242 0.911243 2.20520806 Halalkalicoccus sp. 1973143 Archaea Archaea 143 3.88e-38   NR MEM4781176.1 1973143 g469169 i0 90.9 0.954545454545455 77 7 95.5 0 240 10 445 521 MEM4781176.1 BCCT family transporter [Halalkalicoccus sp.] diamond 231 143 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;