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contig_metadata

37 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 37 ✖

tax_clade 1

bioproject 1

  • PRJNA680334 · 37 ✖

analysis 1

  • diamond · 37 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26904042 26904042 PRJNA680334_S_NODE_15141_length_277_cov_4.028689_g14655_i0 PRJNA680334 15141 277 4.028689 11.15946853 Viruses 10239 Viruses Viruses 80.1 4.14e-15   NR QNN89174.1 2768767 g14655 i0 42.5 2.69675090252708 87 50 94.2 0 263 3 1604 1690 QNN89174.1 polyprotein [Ceratobasidium endornavirus 2] diamond 747 80.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Ceratobasidium endornavirus 2
27018676 27018676 PRJNA680334_S_NODE_26502_length_233_cov_5.875000_g26016_i0 PRJNA680334 26502 233 5.875 13.68875 Vibrio phage vB_VibM_1 3075960 Viruses Viruses 86.7 1.79e-18   NR WNO47358.1 3075960 g26016 i0 60.6 0.849785407725322 66 26 85 0 2 199 195 260 WNO47358.1 hypothetical protein [Vibrio phage vB_VibM_10AMN] diamond 198 86.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VibM_10AMN
27113377 27113377 PRJNA680334_S_NODE_31762_length_221_cov_1.755319_g31276_i0 PRJNA680334 31762 221 1.755319 3.87925499 Bacteriophage sp. 38018 Viruses Viruses 60.1 5.21e-9   NR BDH16552.1 38018 g31276 i0 60 0.610859728506787 45 18 61.1 0 139 5 3 47 BDH16552.1 MAG: hypothetical protein [Bacteriophage sp.] diamond 135 60.1 1 Viruses               Bacteriophage sp.
27188413 27188413 PRJNA680334_S_NODE_70242_length_172_cov_3.129496_g69756_i0 PRJNA680334 70242 172 3.129496 5.38273312 Myoalterovirus 2843427 Viruses Viruses 41.6 0.0205   NR QDP64754.1 2591644 g69756 i0 44.6 1.95348837209302 56 27 97.7 1 168 1 56 107 QDP64754.1 MAG: hypothetical protein GOVbin2917_69 [Prokaryotic dsDNA virus sp.] diamond 336 41.6 1 Viruses               Prokaryotic dsDNA virus sp.
27902999 27902999 PRJNA680334_S_NODE_52605_length_189_cov_1.852564_g52119_i0 PRJNA680334 52605 189 1.852564 3.50134596 Klosneuvirus KNV1 1977640 Viruses Viruses 90.1 3.52e-19   NR ARF11617.1 1977640 g52119 i0 62.9 0.984126984126984 62 23 98.4 0 186 1 376 437 ARF11617.1 lysyl-tRNA synthetase [Klosneuvirus KNV1] diamond 186 90.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
27966282 27966282 PRJNA680334_S_NODE_22045_length_247_cov_2.883178_g21559_i0 PRJNA680334 22045 247 2.883178 7.12144966 Skokie reo-like virus 2789444 Viruses Viruses 65.1 5.35e-10   NR QPF16728.1 2789444 g21559 i0 40.5 0.898785425101215 74 42 89.9 1 26 247 686 757 QPF16728.1 hypothetical protein 2 [Skokie reo-like virus] diamond 222 65.1 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
27966299 27966299 PRJNA680334_S_NODE_69285_length_173_cov_2.100000_g68799_i0 PRJNA680334 69285 173 2.1 3.633 Fadolivirus algeromassiliense 3060017 Viruses Viruses 62.4 1.68e-9   NR YP_010803999.1 3060017 g68799 i0 71.4 0.606936416184971 35 10 60.7 0 30 134 457 491 YP_010803999.1 mitochondrial chaperone BCS1 [Fadolivirus algeromassiliense] diamond 105 62.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
28009920 28009920 PRJNA680334_S_NODE_83245_length_163_cov_1.938462_g82759_i0 PRJNA680334 83245 163 1.938462 3.15969306 root 1 Root_unresolved Root_unresolved 55.8 2.99e-7   NR AFX93238.1 1128140 g82759 i0 54 1.91411042944785 50 23 92 0 2 151 333 382 AFX93238.1 putative transposase [Megavirus courdo11] diamond 312 55.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Megavirus Megavirus chilense
28281888 28281888 PRJNA680334_S_NODE_90066_length_159_cov_1.746032_g89580_i0 PRJNA680334 90066 159 1.746032 2.77619088 Herelleviridae sp. 2831613 Viruses Viruses 44.7 0.002   NR DAR57496.1 2831613 g89580 i0 45.8 0.905660377358491 48 26 90.6 0 14 157 124 171 DAR57496.1 MAG TPA: protein of unknown function (DUF4376) [Herelleviridae sp.] diamond 144 44.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae   Herelleviridae sp.
28440097 28440097 PRJNA680334_S_NODE_92486_length_157_cov_5.483871_g92000_i0 PRJNA680334 92486 157 5.483871 8.60967747 Klosneuvirus KNV1 1977640 Viruses Viruses 42.7 0.0117   NR ARF12021.1 1977640 g92000 i0 50 0.611464968152866 32 16 61.1 0 61 156 241 272 ARF12021.1 RNA ligase [Klosneuvirus KNV1] diamond 96 42.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
28566205 28566205 PRJNA680334_S_NODE_31247_length_222_cov_2.798942_g30761_i0 PRJNA680334 31247 222 2.798942 6.21365124 Bacteriophage sp. 38018 Viruses Viruses 104 4.92e-27   NR BDH16550.1 38018 g30761 i0 66.2 0.959459459459459 71 24 95.9 0 3 215 43 113 BDH16550.1 MAG: hypothetical protein [Bacteriophage sp.] diamond 213 104 1 Viruses               Bacteriophage sp.
28597961 28597961 PRJNA680334_S_NODE_32887_length_218_cov_6.118919_g32401_i0 PRJNA680334 32887 218 6.118919 13.33924342 Klosneuvirus KNV1 1977640 Viruses Viruses 61.6 5.85e-9   NR ARF11649.1 1977640 g32401 i0 50 0.880733944954128 64 32 88.1 0 193 2 384 447 ARF11649.1 transposase [Klosneuvirus KNV1] diamond 192 61.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
28629606 28629606 PRJNA680334_S_NODE_30327_length_224_cov_2.853403_g29841_i0 PRJNA680334 30327 224 2.853403 6.39162272 Terfezia claveryi endornavirus 3 3125848 Viruses Viruses 48.5 2.75e-4   NR WWL46806.1 3125848 g29841 i0 35.6 0.977678571428571 73 44 97.8 1 4 222 3403 3472 WWL46806.1 polyprotein [Terfezia claveryi endornavirus 3] diamond 219 48.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Terfezia claveryi endornavirus 3
28945421 28945421 PRJNA680334_S_NODE_36488_length_211_cov_9.213483_g36002_i0 PRJNA680334 36488 211 9.213483 19.44044913 Edafosvirus sp. 2487765 Viruses Viruses 79.3 3.45e-16   NR AYV78935.1 2487765 g36002 i0 58.3 1.02369668246445 72 28 99.5 1 211 2 116 187 AYV78935.1 MAG: Clp protease, partial [Edafosvirus sp.] diamond 216 79.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
28945423 28945423 PRJNA680334_S_NODE_61268_length_180_cov_1.979592_g60782_i0 PRJNA680334 61268 180 1.979592 3.5632656 Erysiphe necator associated virus 2 2741903 Viruses Viruses 95.5 3.72e-21   NR QKI79984.1 2741903 g60782 i0 81.5 0.9 54 10 90 0 2 163 477 530 QKI79984.1 RNA-dependent RNA polymerase [Erysiphe necator associated virus 2] diamond 162 95.5 1 Viruses               Erysiphe necator associated virus 2
29197915 29197915 PRJNA680334_S_NODE_8749_length_326_cov_17.317406_g8263_i0 PRJNA680334 8749 326 17.317406 56.45474356 Chestnut mosaic virus 2781948 Viruses Viruses 142 5.71e-41   NR QOS14487.1 2781948 g8263 i0 68.5 0.993865030674847 108 34 99.4 0 324 1 5 112 QOS14487.1 hypothetical protein [Chestnut mosaic virus] diamond 324 142 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Badnavirus Badnavirus tessellocastaneae
29576386 29576386 PRJNA680334_S_NODE_83170_length_163_cov_2.146154_g82684_i0 PRJNA680334 83170 163 2.146154 3.49823102 Caudoviricetes sp. 2832643 Viruses Viruses 70.1 2.85e-12   NR XOR16660.1 2832643 g82684 i0 63 0.993865030674847 54 20 99.4 0 162 1 543 596 XOR16660.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 162 70.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29639470 29639470 PRJNA680334_S_NODE_25390_length_236_cov_10.758621_g24904_i0 PRJNA680334 25390 236 10.758621 25.39034556 Caudoviricetes sp. 2832643 Viruses Viruses 99.8 5.71e-25   NR XOQ97186.1 2832643 g24904 i0 82.1 0.711864406779661 56 10 71.2 0 203 36 1 56 XOQ97186.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 168 99.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29702519 29702519 PRJNA680334_S_NODE_6150_length_363_cov_7.518182_g5665_i0 PRJNA680334 6150 363 7.518182 27.29100066 Rheinheimera phage Barba5S 2849599 Viruses Viruses 140 3.61e-39   NR YP_009822707.1 2849599 g5665 i0 54 3.02479338842975 124 53 100 2 1 363 86 208 YP_009822707.1 HNH endonuclease [Rheinheimera phage Barba5S] diamond 1098 140 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Barbavirus Barbavirus barba5S
29955590 29955590 PRJNA680334_S_NODE_70011_length_172_cov_4.381295_g69525_i0 PRJNA680334 70011 172 4.381295 7.5358274 Bacteriophage sp. 38018 Viruses Viruses 83.2 7.82e-19   NR BDH16550.1 38018 g69525 i0 60.7 1.95348837209302 56 22 97.7 0 3 170 45 100 BDH16550.1 MAG: hypothetical protein [Bacteriophage sp.] diamond 336 83.2 1 Viruses               Bacteriophage sp.
29967432 29967432 PRJNA680334_S_NODE_4511_length_399_cov_3.193989_g4029_i0 PRJNA680334 4511 399 3.193989 12.74401611 Viruses 10239 Viruses Viruses 82.8 7.74e-16   NR DAD96844.1 2826295 g4029 i0 32.1 2.67669172932331 140 87 99.2 3 399 4 86 225 DAD96844.1 MAG TPA: endonuclease [Siphoviridae sp. ct5op20] diamond 1068 83.2 0.995192307692308 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ct5op20
30113456 30113456 PRJNA680334_S_NODE_26472_length_233_cov_7.125000_g25986_i0 PRJNA680334 26472 233 7.125 16.60125 Bloomfield virus 1654577 Viruses Viruses 43.1 0.0238   NR AKH40315.1 1654577 g25986 i0 32.9 1.09442060085837 85 44 92.7 3 3 218 412 496 AKH40315.1 ORF1 [Bloomfield virus] diamond 255 43.1 1 Viruses               Bloomfield virus
30144806 30144806 PRJNA680334_S_NODE_28592_length_228_cov_3.128205_g28106_i0 PRJNA680334 28592 228 3.128205 7.1323074 Plantago potyvirus 1 2950875 Viruses Viruses 73.6 4.28e-13   NR UTQ50667.1 2950875 g28106 i0 46.7 0.986842105263158 75 40 98.7 0 2 226 338 412 UTQ50667.1 MAG: polyprotein [Plantago potyvirus 1] diamond 225 73.6 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Plantago potyvirus 1
30283736 30283736 PRJNA680334_S_NODE_74532_length_169_cov_1.830882_g74046_i0 PRJNA680334 74532 169 1.830882 3.09419058 Viruses 10239 Viruses Viruses 59.7 6.8e-10   NR UZV41323.1 2996088 g74046 i0 60.6 1.17159763313609 33 13 58.6 0 20 118 56 88 UZV41323.1 TMhelix containing protein [Vibrio phage vB_VpaM_R16F] diamond 198 59.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VpaM_R16F
30303573 30303573 PRJNA680334_S_NODE_10252_length_312_cov_3.387097_g9766_i0 PRJNA680334 10252 312 3.387097 10.56774264 Grapevine-associated tymo-like virus 2 2814378 Viruses Viruses 98.2 7.96e-22   NR QXN75448.1 2814378 g9766 i0 72.1 0.586538461538462 61 17 58.7 0 311 129 295 355 QXN75448.1 MAG: RNA-dependent RNA polymerase, partial [Grapevine-associated tymo-like virus 2] diamond 183 98.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Grapevine-associated tymo-like virus 2
30347036 30347036 PRJNA680334_S_NODE_71312_length_171_cov_3.768116_g70826_i0 PRJNA680334 71312 171 3.768116 6.44347836 root 1 Root_unresolved Root_unresolved 89 6.92e-19   NR UVX89042.1 38018 g70826 i0 75 3.78947368421053 56 13 98.2 1 3 170 49 103 UVX89042.1 MAG: Terminase [Bacteriophage sp.] diamond 648 89 1 Viruses               Bacteriophage sp.
30429886 30429886 PRJNA680334_S_NODE_75793_length_168_cov_2.162963_g75307_i0 PRJNA680334 75793 168 2.162963 3.63377784 Staphylococcus phage PMBT8 2590894 Viruses Viruses 58.5 3.55e-8   NR QDF14320.1 2590894 g75307 i0 60.5 0.767857142857143 43 17 76.8 0 35 163 1055 1097 QDF14320.1 tail length tape-measure protein [Staphylococcus phage PMBT8] diamond 129 58.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sextaecvirus Staphylococcus phage PMBT8
30650427 30650427 PRJNA680334_S_NODE_19273_length_257_cov_5.964286_g18787_i0 PRJNA680334 19273 257 5.964286 15.32821502 Acinetobacter phage Phab24 2855484 Viruses Viruses 58.2 1.09e-7   NR QXM18517.1 2855484 g18787 i0 64.1 0.455252918287938 39 14 45.5 0 118 2 3 41 QXM18517.1 hypothetical protein Phab24_id071 [Acinetobacter phage Phab24] diamond 117 58.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Acinetobacter phage Phab24
30745452 30745452 PRJNA680334_S_NODE_2254_length_493_cov_26.084783_g1783_i0 PRJNA680334 2254 493 26.084783 128.59798019 Erysiphe necator associated flexivirus 3 2743100 Viruses Viruses 236 1.96e-68   NR QKN22675.1 2743100 g1783 i0 95.1 0.742393509127789 122 6 74.2 0 1 366 1871 1992 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 366 236 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3
30745459 30745459 PRJNA680334_S_NODE_5214_length_381_cov_8.295977_g4729_i0 PRJNA680334 5214 381 8.295977 31.60767237 Blackcurrant reversion virus satellite RNA 99930 Viruses Viruses 112 2.11e-26   NR NP_624321.1 99930 g4729 i0 73.6 0.566929133858268 72 17 55.1 1 2 211 331 402 NP_624321.1 hypothetical protein [Blackcurrant reversion virus satellite RNA] diamond 216 112 1 Viruses RNA satellites             Blackcurrant reversion virus satellite RNA
30840272 30840272 PRJNA680334_S_NODE_98014_length_154_cov_6.578512_g97528_i0 PRJNA680334 98014 154 6.578512 10.13090848 Rosellinia necatrix partitivirus 9 2056550 Viruses Viruses 77.4 6.66e-15   NR BBB86797.1 2056550 g97528 i0 86.8 1.5 38 5 74 0 41 154 99 136 BBB86797.1 RNA-dependent RNA polymerase [Rosellinia necatrix partitivirus 9] diamond 231 77.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Rosellinia necatrix partitivirus 9
31567579 31567579 PRJNA680334_S_NODE_95376_length_156_cov_1.967480_g94890_i0 PRJNA680334 95376 156 1.96748 3.0692688 Botourmiaviridae sp. 2808997 Viruses Viruses 69.3 4.89e-12   NR UYL94596.1 2808997 g94890 i0 70 0.961538461538462 50 15 96.2 0 7 156 620 669 UYL94596.1 MAG: RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 150 69.3 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
31642217 31642217 PRJNA680334_S_NODE_107616_length_150_cov_1.897436_g107130_i0 PRJNA680334 107616 150 1.897436 2.846154 root 1 Root_unresolved Root_unresolved 69.7 3.28e-12   NR ARF09766.1 1977633 g107130 i0 64 15.88 50 18 100 0 150 1 1467 1516 ARF09766.1 ribonucleoside diphosphate reductase large subunit [Indivirus ILV1] diamond 2382 70.1 0.994293865905849 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
32136857 32136857 PRJNA680334_S_NODE_53298_length_188_cov_2.658065_g52812_i0 PRJNA680334 53298 188 2.658065 4.9971622 uncultured virus 340016 Viruses Viruses 91.7 5.5500000000000005e-22   NR ANW11613.1 340016 g52812 i0 66.1 1.97872340425532 62 21 98.9 0 186 1 33 94 ANW11613.1 phosphate-starvation inducible protein, partial [uncultured virus] diamond 372 91.7 1 Viruses               uncultured virus
32358517 32358517 PRJNA680334_S_NODE_36879_length_211_cov_2.061798_g36393_i0 PRJNA680334 36879 211 2.061798 4.35039378 Harvfovirus sp. 2487768 Viruses Viruses 77.4 1.51e-14   NR AYV81429.1 2487768 g36393 i0 50 2.90047393364929 68 34 96.7 0 2 205 730 797 AYV81429.1 MAG: ubiquitin-conjugating enzyme E2 [Harvfovirus sp.] diamond 612 77.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Harvfovirus sp.
32579841 32579841 PRJNA680334_S_NODE_107559_length_150_cov_2.017094_g107073_i0 PRJNA680334 107559 150 2.017094 3.025641 Microvirus sp. 2202559 Viruses Viruses 65.1 4.09e-12   NR QJB21187.1 2202559 g107073 i0 93.9 0.66 33 2 66 0 100 2 1 33 QJB21187.1 MAG: hypothetical protein [Microvirus sp.] diamond 99 65.1 1 Viruses   Sangervirae Phixviricota Malgrandaviricetes Petitvirales Microviridae   Microvirus sp.
32799910 32799910 PRJNA680334_S_NODE_82980_length_163_cov_2.584615_g82494_i0 PRJNA680334 82980 163 2.584615 4.21292245 Edafosvirus sp. 2487765 Viruses Viruses 43.9 0.00478   NR AYV78613.1 2487765 g82494 i0 50 0.736196319018405 40 20 73.6 0 27 146 243 282 AYV78613.1 MAG: GIY-YIG catalytic domain-containing endonuclease [Edafosvirus sp.] diamond 120 43.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;