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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA680334 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26860791 26860791 PRJNA680334_S_NODE_36261_length_212_cov_2.581006_g35775_i0 PRJNA680334 36261 212 2.581006 5.47173272 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 144 2.849999999999999e-41   NR MDW0176875.1 2169593 g35775 i0 97.1 0.990566037735849 70 2 99.1 0 210 1 109 178 MDW0176875.1 extracellular solute-binding protein [Nitrososphaeraceae archaeon] diamond 210 144 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
26986912 26986912 PRJNA680334_S_NODE_57622_length_183_cov_5.046667_g57136_i0 PRJNA680334 57622 183 5.046667 9.23540061 archaeon 1906665 Archaea Archaea 112 3.7e-27   NR NCQ52301.1 1906665 g57136 i0 83.6 1 61 10 100 0 183 1 81 141 NCQ52301.1 TraM recognition domain-containing protein [archaeon] diamond 183 112 1 Archaea               archaeon
28692756 28692756 PRJNA680334_S_NODE_79767_length_165_cov_3.090909_g79281_i0 PRJNA680334 79767 165 3.090909 5.09999985 archaeon 1906665 Archaea Archaea 78.6 1.64e-16   NR RYH29614.1 1906665 g79281 i0 77.8 0.818181818181818 45 10 81.8 0 4 138 126 170 RYH29614.1 MAG: hypothetical protein EON65_07920 [archaeon] diamond 135 78.6 1 Archaea               archaeon
29197907 29197907 PRJNA680334_S_NODE_61789_length_179_cov_4.671233_g61303_i0 PRJNA680334 61789 179 4.671233 8.36150707 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 57.4 1.04e-7   NR MFA5071071.1 2026773 g61303 i0 43.9 0.955307262569832 57 32 95.5 0 177 7 15 71 MFA5071071.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 171 57.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29619565 29619565 PRJNA680334_S_NODE_83190_length_163_cov_2.100000_g82704_i0 PRJNA680334 83190 163 2.1 3.423 root 1 Root_unresolved Root_unresolved 79.7 4.26e-17   NR MDH4123739.1 1906666 g82704 i0 79.2 5.83435582822086 53 9 97.5 1 3 161 86 136 MDH4123739.1 hypothetical protein [Thermoplasmata archaeon] diamond 951 79.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
29955591 29955591 PRJNA680334_S_NODE_73331_length_170_cov_1.218978_g72845_i0 PRJNA680334 73331 170 1.218978 2.0722626 archaeon 1906665 Archaea Archaea 64.7 2.06e-10   NR NCQ52286.1 1906665 g72845 i0 56.4 0.970588235294118 55 24 97.1 0 4 168 200 254 NCQ52286.1 amino acid ABC transporter substrate-binding protein [archaeon] diamond 165 64.7 1 Archaea               archaeon
30208032 30208032 PRJNA680334_S_NODE_20132_length_254_cov_2.610860_g19646_i0 PRJNA680334 20132 254 2.61086 6.6315844 archaeon 1906665 Archaea Archaea 90.5 6.72e-19   NR NCQ52315.1 1906665 g19646 i0 72.1 0.720472440944882 61 17 72 0 254 72 618 678 NCQ52315.1 DotA/TraY family protein [archaeon] diamond 183 90.5 1 Archaea               archaeon
30441426 30441426 PRJNA680334_S_NODE_12693_length_292_cov_2.915058_g12207_i0 PRJNA680334 12693 292 2.915058 8.51196936 Candidatus Lokiarchaeum 1655637 Archaea Archaea 50.1 7.08e-5   NR KKK40351.1 1538547 g12207 i0 33.3 1.24315068493151 63 42 64.7 0 83 271 14 76 KKK40351.1 MAG: Recombination endonuclease VII [Candidatus Lokiarchaeum sp. GC14_75] diamond 363 50.1 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Lokiarchaeum Candidatus Lokiarchaeum sp. GC14_75
32863029 32863029 PRJNA680334_S_NODE_63320_length_178_cov_2.337931_g62834_i0 PRJNA680334 63320 178 2.337931 4.16151718 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 52.4 5.76e-6   NR MCJ7636234.1 2169593 g62834 i0 48.3 1.92134831460674 60 29 97.8 1 178 5 185 244 MCJ7636234.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 342 52.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;