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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA680334 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27366716 27366716 PRJNA680334_S_NODE_94603_length_156_cov_3.642276_g94117_i0 PRJNA680334 94603 156 3.642276 5.68195056 Prosthecobacter sp. 1965333 Bacteria Bacteria 48.9 2.64e-5   NR HEY1052478.1 1965333 g94117 i0 91.7 0.461538461538462 24 2 46.2 0 154 83 122 145 HEY1052478.1 hypothetical protein [Prosthecobacter sp.] diamond 72 48.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
27934846 27934846 PRJNA680334_S_NODE_47805_length_194_cov_5.894410_g47319_i0 PRJNA680334 47805 194 5.89441 11.4351554 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 41.6 0.0238   NR MFT5409024.1 2026801 g47319 i0 37.5 0.865979381443299 56 35 86.6 0 15 182 16 71 MFT5409024.1 Fe-S-cluster containining protein [Verrucomicrobiales bacterium] diamond 168 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28124293 28124293 PRJNA680334_S_NODE_81265_length_164_cov_2.946565_g80779_i0 PRJNA680334 81265 164 2.946565 4.8323666 Akkermansia sp. 1872421 Bacteria Bacteria 51.6 2.89e-6   NR MBQ3143436.1 1872421 g80779 i0 49.1 0.969512195121951 53 23 89.6 1 17 163 65 117 MBQ3143436.1 hypothetical protein [Akkermansia sp.] diamond 159 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
29797512 29797512 PRJNA680334_S_NODE_52211_length_189_cov_3.967949_g51725_i0 PRJNA680334 52211 189 3.967949 7.49942361 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 43.1 0.0136   NR HAL05353.1 2026801 g51725 i0 38.5 3.3015873015873 52 24 71.4 2 55 189 4 54 HAL05353.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 624 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30176656 30176656 PRJNA680334_S_NODE_71432_length_171_cov_3.152174_g70946_i0 PRJNA680334 71432 171 3.152174 5.39021754 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 50.4 2.67e-5   NR HEU5069142.1 2499141 g70946 i0 60 1.19298245614035 35 14 61.4 0 37 141 282 316 HEU5069142.1 bile acid:sodium symporter family protein [Verrucomicrobiia bacterium] diamond 204 50.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30429875 30429875 PRJNA680334_S_NODE_18673_length_260_cov_2.488987_g18187_i0 PRJNA680334 18673 260 2.488987 6.4713662 Brevifollis gellanilyticus 748831 Bacteria Bacteria 109 1.29e-25   NR WP_146854010.1 748831 g18187 i0 68.7 0.957692307692308 83 26 95.8 0 1 249 993 1075 WP_146854010.1 FtsX-like permease family protein [Brevifollis gellanilyticus] diamond 249 109 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
30587341 30587341 PRJNA680334_S_NODE_82173_length_163_cov_9.253846_g81687_i0 PRJNA680334 82173 163 9.253846 15.08376898 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 80.9 2.06e-16   NR MBA3834005.1 2201154 g81687 i0 82.2 0.828220858895706 45 8 82.8 0 1 135 272 316 MBA3834005.1 IS481 family transposase [Chthoniobacterales bacterium] diamond 135 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31187466 31187466 PRJNA680334_S_NODE_23235_length_243_cov_2.619048_g22749_i0 PRJNA680334 23235 243 2.619048 6.36428664 Terrimicrobium sacchariphilum 690879 Bacteria Bacteria 43.9 0.0142   NR WP_075080473.1 690879 g22749 i0 52.1 0.592592592592593 48 23 59.3 0 144 1 6 53 WP_075080473.1 hypothetical protein [Terrimicrobium sacchariphilum] diamond 144 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sacchariphilum
31377695 31377695 PRJNA680334_S_NODE_67836_length_174_cov_2.758865_g67350_i0 PRJNA680334 67836 174 2.758865 4.8004251 Candidatus Udaeobacter sp. 2665650 Bacteria Bacteria 57.4 9.75e-9   NR HEY2680206.1 2665650 g67350 i0 93.3 3.06896551724138 30 2 51.7 0 2 91 62 91 HEY2680206.1 biotin/lipoyl-containing protein [Candidatus Udaeobacter sp.] diamond 534 57.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
31599152 31599152 PRJNA680334_S_NODE_93016_length_157_cov_2.967742_g92530_i0 PRJNA680334 93016 157 2.967742 4.65935494 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 94 2.1e-21   NR HEX7516570.1 2201154 g92530 i0 84.6 1.96815286624204 52 8 99.4 0 157 2 90 141 HEX7516570.1 hypothetical protein [Chthoniobacterales bacterium] diamond 309 94 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32611173 32611173 PRJNA680334_S_NODE_76040_length_168_cov_1.555556_g75554_i0 PRJNA680334 76040 168 1.555556 2.61333408 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 91.7 6.55e-20   NR HXT84495.1 2499141 g75554 i0 93.5 0.821428571428571 46 3 82.1 0 31 168 86 131 HXT84495.1 phosphopantothenoylcysteine decarboxylase [Verrucomicrobiia bacterium] diamond 138 91.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;