RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA680334 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018676 27018676 PRJNA680334_S_NODE_26502_length_233_cov_5.875000_g26016_i0 PRJNA680334 26502 233 5.875 13.68875 Vibrio phage vB_VibM_1 3075960 Viruses Viruses 86.7 1.79e-18   NR WNO47358.1 3075960 g26016 i0 60.6 0.849785407725322 66 26 85 0 2 199 195 260 WNO47358.1 hypothetical protein [Vibrio phage vB_VibM_10AMN] diamond 198 86.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VibM_10AMN
28281888 28281888 PRJNA680334_S_NODE_90066_length_159_cov_1.746032_g89580_i0 PRJNA680334 90066 159 1.746032 2.77619088 Herelleviridae sp. 2831613 Viruses Viruses 44.7 0.002   NR DAR57496.1 2831613 g89580 i0 45.8 0.905660377358491 48 26 90.6 0 14 157 124 171 DAR57496.1 MAG TPA: protein of unknown function (DUF4376) [Herelleviridae sp.] diamond 144 44.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Herelleviridae   Herelleviridae sp.
29576386 29576386 PRJNA680334_S_NODE_83170_length_163_cov_2.146154_g82684_i0 PRJNA680334 83170 163 2.146154 3.49823102 Caudoviricetes sp. 2832643 Viruses Viruses 70.1 2.85e-12   NR XOR16660.1 2832643 g82684 i0 63 0.993865030674847 54 20 99.4 0 162 1 543 596 XOR16660.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 162 70.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29639470 29639470 PRJNA680334_S_NODE_25390_length_236_cov_10.758621_g24904_i0 PRJNA680334 25390 236 10.758621 25.39034556 Caudoviricetes sp. 2832643 Viruses Viruses 99.8 5.71e-25   NR XOQ97186.1 2832643 g24904 i0 82.1 0.711864406779661 56 10 71.2 0 203 36 1 56 XOQ97186.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 168 99.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29702519 29702519 PRJNA680334_S_NODE_6150_length_363_cov_7.518182_g5665_i0 PRJNA680334 6150 363 7.518182 27.29100066 Rheinheimera phage Barba5S 2849599 Viruses Viruses 140 3.61e-39   NR YP_009822707.1 2849599 g5665 i0 54 3.02479338842975 124 53 100 2 1 363 86 208 YP_009822707.1 HNH endonuclease [Rheinheimera phage Barba5S] diamond 1098 140 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Barbavirus Barbavirus barba5S
29967432 29967432 PRJNA680334_S_NODE_4511_length_399_cov_3.193989_g4029_i0 PRJNA680334 4511 399 3.193989 12.74401611 Viruses 10239 Viruses Viruses 82.8 7.74e-16   NR DAD96844.1 2826295 g4029 i0 32.1 2.67669172932331 140 87 99.2 3 399 4 86 225 DAD96844.1 MAG TPA: endonuclease [Siphoviridae sp. ct5op20] diamond 1068 83.2 0.995192307692308 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ct5op20
30283736 30283736 PRJNA680334_S_NODE_74532_length_169_cov_1.830882_g74046_i0 PRJNA680334 74532 169 1.830882 3.09419058 Viruses 10239 Viruses Viruses 59.7 6.8e-10   NR UZV41323.1 2996088 g74046 i0 60.6 1.17159763313609 33 13 58.6 0 20 118 56 88 UZV41323.1 TMhelix containing protein [Vibrio phage vB_VpaM_R16F] diamond 198 59.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VpaM_R16F
30429886 30429886 PRJNA680334_S_NODE_75793_length_168_cov_2.162963_g75307_i0 PRJNA680334 75793 168 2.162963 3.63377784 Staphylococcus phage PMBT8 2590894 Viruses Viruses 58.5 3.55e-8   NR QDF14320.1 2590894 g75307 i0 60.5 0.767857142857143 43 17 76.8 0 35 163 1055 1097 QDF14320.1 tail length tape-measure protein [Staphylococcus phage PMBT8] diamond 129 58.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Sextaecvirus Staphylococcus phage PMBT8
30650427 30650427 PRJNA680334_S_NODE_19273_length_257_cov_5.964286_g18787_i0 PRJNA680334 19273 257 5.964286 15.32821502 Acinetobacter phage Phab24 2855484 Viruses Viruses 58.2 1.09e-7   NR QXM18517.1 2855484 g18787 i0 64.1 0.455252918287938 39 14 45.5 0 118 2 3 41 QXM18517.1 hypothetical protein Phab24_id071 [Acinetobacter phage Phab24] diamond 117 58.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Acinetobacter phage Phab24

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;