RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA680334 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30144806 30144806 PRJNA680334_S_NODE_28592_length_228_cov_3.128205_g28106_i0 PRJNA680334 28592 228 3.128205 7.1323074 Plantago potyvirus 1 2950875 Viruses Viruses 73.6 4.28e-13   NR UTQ50667.1 2950875 g28106 i0 46.7 0.986842105263158 75 40 98.7 0 2 226 338 412 UTQ50667.1 MAG: polyprotein [Plantago potyvirus 1] diamond 225 73.6 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Plantago potyvirus 1
30840272 30840272 PRJNA680334_S_NODE_98014_length_154_cov_6.578512_g97528_i0 PRJNA680334 98014 154 6.578512 10.13090848 Rosellinia necatrix partitivirus 9 2056550 Viruses Viruses 77.4 6.66e-15   NR BBB86797.1 2056550 g97528 i0 86.8 1.5 38 5 74 0 41 154 99 136 BBB86797.1 RNA-dependent RNA polymerase [Rosellinia necatrix partitivirus 9] diamond 231 77.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Rosellinia necatrix partitivirus 9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;