contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27366703 | 27366703 | PRJNA680334_S_NODE_19623_length_256_cov_2.260090_g19137_i0 | PRJNA680334 | 19623 | 256 | 2.26009 | 5.7858304 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 48.5 | 1.18e-4 | NR | WP_171411814.1 | 2316736 | g19137 | i0 | 43.6 | 0.64453125 | 55 | 29 | 62.1 | 1 | 160 | 2 | 10 | 64 | WP_171411814.1 four-helix bundle copper-binding protein [Corallococcus exercitus] | diamond | 165 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 28408428 | 28408428 | PRJNA680334_S_NODE_26566_length_233_cov_4.375000_g26080_i0 | PRJNA680334 | 26566 | 233 | 4.375 | 10.19375 | Archangium sp. | 1872627 | Bacteria | Bacteria | 43.1 | 0.0228 | NR | HYO69591.1 | 1872627 | g26080 | i0 | 48.8 | 2.0343347639485 | 41 | 21 | 52.8 | 0 | 106 | 228 | 217 | 257 | HYO69591.1 tetratricopeptide repeat protein [Archangium sp.] | diamond | 474 | 43.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 28534890 | 28534890 | PRJNA680334_S_NODE_26867_length_232_cov_5.798995_g26381_i0 | PRJNA680334 | 26867 | 232 | 5.798995 | 13.4536684 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 44.3 | 0.00941 | NR | MFN7130904.1 | 2026763 | g26381 | i0 | 44.9 | 0.633620689655172 | 49 | 27 | 63.4 | 0 | 25 | 171 | 357 | 405 | MFN7130904.1 DPP IV N-terminal domain-containing protein [Myxococcales bacterium] | diamond | 147 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28661074 | 28661074 | PRJNA680334_S_NODE_53187_length_188_cov_3.251613_g52701_i0 | PRJNA680334 | 53187 | 188 | 3.251613 | 6.11303244 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 101 | 7.58e-25 | NR | MBL9100014.1 | 2026763 | g52701 | i0 | 78.7 | 0.973404255319149 | 61 | 13 | 97.3 | 0 | 187 | 5 | 96 | 156 | MBL9100014.1 glutathione S-transferase N-terminal domain-containing protein [Myxococcales bacterium] | diamond | 183 | 101 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30461517 | 30461517 | PRJNA680334_S_NODE_16653_length_269_cov_3.601695_g16167_i0 | PRJNA680334 | 16653 | 269 | 3.601695 | 9.68855955 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 44.3 | 0.015 | NR | RYE95084.1 | 2026763 | g16167 | i0 | 48.9 | 0.50185873605948 | 45 | 23 | 50.2 | 0 | 197 | 63 | 977 | 1021 | RYE95084.1 MAG: hypothetical protein EOO75_00210 [Myxococcales bacterium] | diamond | 135 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;