RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA680334 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26904042 26904042 PRJNA680334_S_NODE_15141_length_277_cov_4.028689_g14655_i0 PRJNA680334 15141 277 4.028689 11.15946853 Viruses 10239 Viruses Viruses 80.1 4.14e-15   NR QNN89174.1 2768767 g14655 i0 42.5 2.69675090252708 87 50 94.2 0 263 3 1604 1690 QNN89174.1 polyprotein [Ceratobasidium endornavirus 2] diamond 747 80.1 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Ceratobasidium endornavirus 2
28629606 28629606 PRJNA680334_S_NODE_30327_length_224_cov_2.853403_g29841_i0 PRJNA680334 30327 224 2.853403 6.39162272 Terfezia claveryi endornavirus 3 3125848 Viruses Viruses 48.5 2.75e-4   NR WWL46806.1 3125848 g29841 i0 35.6 0.977678571428571 73 44 97.8 1 4 222 3403 3472 WWL46806.1 polyprotein [Terfezia claveryi endornavirus 3] diamond 219 48.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Endornaviridae   Terfezia claveryi endornavirus 3
30303573 30303573 PRJNA680334_S_NODE_10252_length_312_cov_3.387097_g9766_i0 PRJNA680334 10252 312 3.387097 10.56774264 Grapevine-associated tymo-like virus 2 2814378 Viruses Viruses 98.2 7.96e-22   NR QXN75448.1 2814378 g9766 i0 72.1 0.586538461538462 61 17 58.7 0 311 129 295 355 QXN75448.1 MAG: RNA-dependent RNA polymerase, partial [Grapevine-associated tymo-like virus 2] diamond 183 98.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Grapevine-associated tymo-like virus 2
30745452 30745452 PRJNA680334_S_NODE_2254_length_493_cov_26.084783_g1783_i0 PRJNA680334 2254 493 26.084783 128.59798019 Erysiphe necator associated flexivirus 3 2743100 Viruses Viruses 236 1.96e-68   NR QKN22675.1 2743100 g1783 i0 95.1 0.742393509127789 122 6 74.2 0 1 366 1871 1992 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 366 236 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;