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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA680334" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 31 ✖

bioproject 1

  • PRJNA680334 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6273090 6273090 PRJNA680334_S_NODE_104125_length_151_cov_6.728814_g103639_i0 PRJNA680334 104125 151 6.728814 10.16050914 Planctomycetaceae bacterium 2026779 Bacteria Bacteria 65.9 7.09e-11   NR MCC7423088.1 2026779 g103639 i0 76.6 0.933774834437086 47 10 93.4 1 9 149 15 60 MCC7423088.1 DUF1254 domain-containing protein [Planctomycetaceae bacterium] diamond 141 65.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
8303351 8303351 PRJNA680334_S_NODE_59327_length_182_cov_1.369128_g58841_i0 PRJNA680334 59327 182 1.369128 2.49181296 Bacteria 2 Bacteria Bacteria 124 2.08e-33   NR MBM4070672.1 2026780 g58841 i0 100 2.93406593406593 59 0 97.3 0 2 178 39 97 MBM4070672.1 DUF4405 domain-containing protein [Planctomycetota bacterium] diamond 534 125 0.992 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26797144 26797144 PRJNA680334_S_NODE_9341_length_320_cov_32.076655_g8855_i0 PRJNA680334 9341 320 32.076655 102.645296 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.0198   NR MEY4673374.1 2026780 g8855 i0 37 0.684375 73 43 66.6 2 61 273 1013 1084 MEY4673374.1 hypothetical protein [Planctomycetota bacterium] diamond 219 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26828940 26828940 PRJNA680334_S_NODE_16481_length_270_cov_2.367089_g15995_i0 PRJNA680334 16481 270 2.367089 6.3911403 Chlamydiales bacterium 2047757 Bacteria Bacteria 132 9.99e-36   NR HSX11004.1 2047757 g15995 i0 71.9 0.988888888888889 89 25 98.9 0 270 4 31 119 HSX11004.1 tetraacyldisaccharide 4'-kinase [Chlamydiales bacterium] diamond 267 132 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27124981 27124981 PRJNA680334_S_NODE_45082_length_198_cov_3.315152_g44596_i0 PRJNA680334 45082 198 3.315152 6.56400096 Pseudomonadati 3379134 Bacteria Bacteria 92 7.56e-21   NR HEY3966710.1 2026779 g44596 i0 80.7 12.0909090909091 57 11 86.4 0 172 2 1 57 HEY3966710.1 glucose 1-dehydrogenase [Planctomycetaceae bacterium] diamond 2394 92 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   Planctomycetaceae bacterium
27366716 27366716 PRJNA680334_S_NODE_94603_length_156_cov_3.642276_g94117_i0 PRJNA680334 94603 156 3.642276 5.68195056 Prosthecobacter sp. 1965333 Bacteria Bacteria 48.9 2.64e-5   NR HEY1052478.1 1965333 g94117 i0 91.7 0.461538461538462 24 2 46.2 0 154 83 122 145 HEY1052478.1 hypothetical protein [Prosthecobacter sp.] diamond 72 48.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
27839862 27839862 PRJNA680334_S_NODE_9604_length_318_cov_3.800000_g9118_i0 PRJNA680334 9604 318 3.8 12.084 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 97.1 2.12e-23   NR MCX5709714.1 2035772 g9118 i0 64.1 1.47169811320755 78 27 72.6 1 86 316 1 78 MCX5709714.1 fluoride efflux transporter CrcB [Candidatus Omnitrophota bacterium] diamond 468 97.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27934846 27934846 PRJNA680334_S_NODE_47805_length_194_cov_5.894410_g47319_i0 PRJNA680334 47805 194 5.89441 11.4351554 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 41.6 0.0238   NR MFT5409024.1 2026801 g47319 i0 37.5 0.865979381443299 56 35 86.6 0 15 182 16 71 MFT5409024.1 Fe-S-cluster containining protein [Verrucomicrobiales bacterium] diamond 168 41.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28092612 28092612 PRJNA680334_S_NODE_47585_length_195_cov_1.586420_g47099_i0 PRJNA680334 47585 195 1.58642 3.093519 Lacipirellulaceae bacterium 2691534 Bacteria Bacteria 79 6.76e-16   NR HVT27669.1 2691534 g47099 i0 55.7 0.938461538461538 61 27 93.8 0 3 185 89 149 HVT27669.1 hypothetical protein [Lacipirellulaceae bacterium] diamond 183 79 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae   Lacipirellulaceae bacterium
28124293 28124293 PRJNA680334_S_NODE_81265_length_164_cov_2.946565_g80779_i0 PRJNA680334 81265 164 2.946565 4.8323666 Akkermansia sp. 1872421 Bacteria Bacteria 51.6 2.89e-6   NR MBQ3143436.1 1872421 g80779 i0 49.1 0.969512195121951 53 23 89.6 1 17 163 65 117 MBQ3143436.1 hypothetical protein [Akkermansia sp.] diamond 159 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28514951 28514951 PRJNA680334_S_NODE_24367_length_239_cov_5.063107_g23881_i0 PRJNA680334 24367 239 5.063107 12.10082573 Chlamydiia 204429 Bacteria Bacteria 65.1 4.24e-10   NR SCA64233.1 1871323 g23881 i0 42.1 2.86192468619247 76 43 95.4 1 5 232 188 262 SCA64233.1 hypothetical protein SCG7086_CW_00010 [Chlamydiales bacterium SCGC AG-110-P3] diamond 684 65.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium SCGC AG-110-P3
28534895 28534895 PRJNA680334_S_NODE_45647_length_197_cov_4.865854_g45161_i0 PRJNA680334 45647 197 4.865854 9.58573238 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 109 8.67e-27   NR HEY7090212.1 2876886 g45161 i0 83.1 0.989847715736041 65 11 99 0 1 195 81 145 HEY7090212.1 lipopolysaccharide heptosyltransferase I [Tepidisphaeraceae bacterium] diamond 195 109 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
29040086 29040086 PRJNA680334_S_NODE_21508_length_249_cov_2.134259_g21022_i0 PRJNA680334 21508 249 2.134259 5.31430491 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 50.1 8.06e-5   NR HRD54787.1 2052176 g21022 i0 38.4 0.879518072289157 73 42 85.5 2 247 35 4 75 HRD54787.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 219 50.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
29197897 29197897 PRJNA680334_S_NODE_27029_length_232_cov_2.869347_g26543_i0 PRJNA680334 27029 232 2.869347 6.65688504 Tepidisphaeraceae bacterium 2876886 Bacteria Bacteria 113 1.98e-29   NR HEY7087992.1 2876886 g26543 i0 63.1 1.08620689655172 84 23 98.3 1 3 230 9 92 HEY7087992.1 nicotinate (nicotinamide) nucleotide adenylyltransferase [Tepidisphaeraceae bacterium] diamond 252 113 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Tepidisphaerales Tepidisphaeraceae   Tepidisphaeraceae bacterium
29260701 29260701 PRJNA680334_S_NODE_69429_length_173_cov_1.735714_g68943_i0 PRJNA680334 69429 173 1.735714 3.00278522 Planctomycetota bacterium 2026780 Bacteria Bacteria 57 1.33e-7   NR MAG57786.1 2026780 g68943 i0 50 0.901734104046243 52 25 88.4 1 172 20 15 66 MAG57786.1 hypothetical protein [Planctomycetota bacterium] diamond 156 57 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29355716 29355716 PRJNA680334_S_NODE_76869_length_167_cov_3.104478_g76383_i0 PRJNA680334 76869 167 3.104478 5.18447826 Parachlamydiales bacterium 2052178 Bacteria Bacteria 110 1.3500000000000002e-26   NR MBX7066161.1 2052178 g76383 i0 92.6 0.970059880239521 54 4 97 0 167 6 53 106 MBX7066161.1 NAD-glutamate dehydrogenase [Parachlamydiales bacterium] diamond 162 110 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
29670997 29670997 PRJNA680334_S_NODE_15630_length_274_cov_4.701245_g15144_i0 PRJNA680334 15630 274 4.701245 12.8814113 Candidatus Laterigemmans baculatus 2770505 Bacteria Bacteria 94 4.549999999999999e-23   NR WP_164102970.1 2770505 g15144 i0 76.8 1.21532846715328 56 13 61.3 0 273 106 11 66 WP_164102970.1 RNA-binding S4 domain-containing protein [Candidatus Laterigemmans baculatus] diamond 333 94 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Candidatus Laterigemmans Candidatus Laterigemmans baculatus
29797512 29797512 PRJNA680334_S_NODE_52211_length_189_cov_3.967949_g51725_i0 PRJNA680334 52211 189 3.967949 7.49942361 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 43.1 0.0136   NR HAL05353.1 2026801 g51725 i0 38.5 3.3015873015873 52 24 71.4 2 55 189 4 54 HAL05353.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 624 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29904298 29904298 PRJNA680334_S_NODE_58191_length_183_cov_1.846667_g57705_i0 PRJNA680334 58191 183 1.846667 3.37940061 PVC group 1783257 Bacteria Bacteria 57.8 7.41e-9   NR MDP6541725.1 2052180 g57705 i0 83.3 4.91803278688525 30 5 49.2 0 177 88 81 110 MDP6541725.1 adenosylhomocysteinase [Phycisphaerales bacterium] diamond 900 57.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
30176656 30176656 PRJNA680334_S_NODE_71432_length_171_cov_3.152174_g70946_i0 PRJNA680334 71432 171 3.152174 5.39021754 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 50.4 2.67e-5   NR HEU5069142.1 2499141 g70946 i0 60 1.19298245614035 35 14 61.4 0 37 141 282 316 HEU5069142.1 bile acid:sodium symporter family protein [Verrucomicrobiia bacterium] diamond 204 50.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
30429875 30429875 PRJNA680334_S_NODE_18673_length_260_cov_2.488987_g18187_i0 PRJNA680334 18673 260 2.488987 6.4713662 Brevifollis gellanilyticus 748831 Bacteria Bacteria 109 1.29e-25   NR WP_146854010.1 748831 g18187 i0 68.7 0.957692307692308 83 26 95.8 0 1 249 993 1075 WP_146854010.1 FtsX-like permease family protein [Brevifollis gellanilyticus] diamond 249 109 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
30587341 30587341 PRJNA680334_S_NODE_82173_length_163_cov_9.253846_g81687_i0 PRJNA680334 82173 163 9.253846 15.08376898 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 80.9 2.06e-16   NR MBA3834005.1 2201154 g81687 i0 82.2 0.828220858895706 45 8 82.8 0 1 135 272 316 MBA3834005.1 IS481 family transposase [Chthoniobacterales bacterium] diamond 135 80.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31187466 31187466 PRJNA680334_S_NODE_23235_length_243_cov_2.619048_g22749_i0 PRJNA680334 23235 243 2.619048 6.36428664 Terrimicrobium sacchariphilum 690879 Bacteria Bacteria 43.9 0.0142   NR WP_075080473.1 690879 g22749 i0 52.1 0.592592592592593 48 23 59.3 0 144 1 6 53 WP_075080473.1 hypothetical protein [Terrimicrobium sacchariphilum] diamond 144 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae Terrimicrobium Terrimicrobium sacchariphilum
31219014 31219014 PRJNA680334_S_NODE_47215_length_195_cov_4.006173_g46729_i0 PRJNA680334 47215 195 4.006173 7.81203735 Gemmata sp. SH-PL17 1630693 Bacteria Bacteria 95.9 1.48e-21   NR WP_082840152.1 1630693 g46729 i0 68.3 1.93846153846154 63 20 96.9 0 189 1 169 231 WP_082840152.1 ISAs1 family transposase [Gemmata sp. SH-PL17] diamond 378 95.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Gemmata Gemmata sp. SH-PL17
31377695 31377695 PRJNA680334_S_NODE_67836_length_174_cov_2.758865_g67350_i0 PRJNA680334 67836 174 2.758865 4.8004251 Candidatus Udaeobacter sp. 2665650 Bacteria Bacteria 57.4 9.75e-9   NR HEY2680206.1 2665650 g67350 i0 93.3 3.06896551724138 30 2 51.7 0 2 91 62 91 HEY2680206.1 biotin/lipoyl-containing protein [Candidatus Udaeobacter sp.] diamond 534 57.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae Candidatus Udaeobacter Candidatus Udaeobacter sp.
31472589 31472589 PRJNA680334_S_NODE_54256_length_187_cov_2.383117_g53770_i0 PRJNA680334 54256 187 2.383117 4.45642879 Chlamydia psittaci 83554 Bacteria Bacteria 83.6 6.9e-19   NR EPP30060.1 1112246 g53770 i0 86.2 0.93048128342246 58 8 93 0 13 186 51 108 EPP30060.1 putative membrane protein, partial [Chlamydia psittaci 08-2626_L3] diamond 174 83.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia psittaci
31535907 31535907 PRJNA680334_S_NODE_18136_length_262_cov_3.703057_g17650_i0 PRJNA680334 18136 262 3.703057 9.70200934 Planctomycetota bacterium 2026780 Bacteria Bacteria 42 0.0377   NR MCC6672320.1 2026780 g17650 i0 42.6 0.698473282442748 61 28 61.8 1 20 181 14 74 MCC6672320.1 hypothetical protein [Planctomycetota bacterium] diamond 183 42 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31599152 31599152 PRJNA680334_S_NODE_93016_length_157_cov_2.967742_g92530_i0 PRJNA680334 93016 157 2.967742 4.65935494 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 94 2.1e-21   NR HEX7516570.1 2201154 g92530 i0 84.6 1.96815286624204 52 8 99.4 0 157 2 90 141 HEX7516570.1 hypothetical protein [Chthoniobacterales bacterium] diamond 309 94 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
31757091 31757091 PRJNA680334_S_NODE_24937_length_238_cov_1.546341_g24451_i0 PRJNA680334 24937 238 1.546341 3.68029158 Pirellulales bacterium 2715253 Bacteria Bacteria 65.5 3.2e-10   NR HUY88976.1 2715253 g24451 i0 46.6 0.920168067226891 73 33 92 1 12 230 367 433 HUY88976.1 hypothetical protein [Pirellulales bacterium] diamond 219 65.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
32611166 32611166 PRJNA680334_S_NODE_39560_length_206_cov_3.965318_g39074_i0 PRJNA680334 39560 206 3.965318 8.16855508 Lacipirellulaceae bacterium 2691534 Bacteria Bacteria 68.9 7e-13   NR HVT27674.1 2691534 g39074 i0 78.4 0.538834951456311 37 8 53.9 0 203 93 96 132 HVT27674.1 co-chaperone GroES family protein [Lacipirellulaceae bacterium] diamond 111 68.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae   Lacipirellulaceae bacterium
32611173 32611173 PRJNA680334_S_NODE_76040_length_168_cov_1.555556_g75554_i0 PRJNA680334 76040 168 1.555556 2.61333408 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 91.7 6.55e-20   NR HXT84495.1 2499141 g75554 i0 93.5 0.821428571428571 46 3 82.1 0 31 168 86 131 HXT84495.1 phosphopantothenoylcysteine decarboxylase [Verrucomicrobiia bacterium] diamond 138 91.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;