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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA675638" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675638 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27839842 27839842 PRJNA675638_S_NODE_7644_length_167_cov_0.864407_g7582_i0 PRJNA675638 7644 167 0.864407 1.44355969 Pseudoloma neurophilia 146866 Fungi Fungi 114 7.47e-32   NR KRH92142.1 146866 g7582 i0 100 0.988023952095808 55 0 98.8 0 165 1 8 62 KRH92142.1 40S ribosomal protein S28 [Pseudoloma neurophilia] diamond 165 114 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
27998076 27998076 PRJNA675638_S_NODE_9005_length_162_cov_0.902655_g8943_i0 PRJNA675638 9005 162 0.902655 1.4623011 Pseudoloma neurophilia 146866 Fungi Fungi 115 3.9999999999999994e-28   NR KRH92938.1 146866 g8943 i0 100 0.981481481481482 53 0 98.1 0 160 2 614 666 KRH92938.1 Nuclear pore complex, Nup98 component (sc Nup145/Nup100/Nup116), partial [Pseudoloma neurophilia] diamond 159 115 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28155962 28155962 PRJNA675638_S_NODE_7845_length_166_cov_0.871795_g7783_i0 PRJNA675638 7845 166 0.871795 1.4471797 Pseudoloma neurophilia 146866 Fungi Fungi 121 1.41e-30   NR KRH92949.1 146866 g7783 i0 100 0.993975903614458 55 0 99.4 0 2 166 49 103 KRH92949.1 hypothetical protein M153_1976000584 [Pseudoloma neurophilia] diamond 165 121 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
28597946 28597946 PRJNA675638_P_NODE_19687_length_165_cov_0.879310_g19490_i0 PRJNA675638 19687 165 0.87931 1.4508615 Pseudoloma neurophilia 146866 Fungi Fungi 115 6.840000000000001e-29   NR KRH93716.1 146866 g19490 i0 100 0.981818181818182 54 0 98.2 0 164 3 284 337 KRH93716.1 Translation initiation factor 2, gamma subunit (eIF-2gamma, GTPase) [Pseudoloma neurophilia] diamond 162 115 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
29260679 29260679 PRJNA675638_P_NODE_19989_length_164_cov_0.886957_g19792_i0 PRJNA675638 19989 164 0.886957 1.45460948 Pseudoloma neurophilia 146866 Fungi Fungi 103 1.17e-25   NR KRH94821.1 146866 g19792 i0 100 0.98780487804878 54 0 98.8 0 2 163 16 69 KRH94821.1 hypothetical protein M153_1310005524 [Pseudoloma neurophilia] diamond 162 103 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30966774 30966774 PRJNA675638_S_NODE_8694_length_163_cov_0.894737_g8632_i0 PRJNA675638 8694 163 0.894737 1.45842131 Pseudoloma neurophilia 146866 Fungi Fungi 113 1.26e-27   NR KRH95228.1 146866 g8632 i0 100 0.975460122699387 53 0 97.5 0 161 3 23 75 KRH95228.1 Transketolase [Pseudoloma neurophilia] diamond 159 113 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
31440715 31440715 PRJNA675638_P_NODE_18736_length_166_cov_0.871795_g18539_i0 PRJNA675638 18736 166 0.871795 1.4471797 Pseudoloma neurophilia 146866 Fungi Fungi 110 7.76e-28   NR KRH93782.1 146866 g18539 i0 100 0.975903614457831 54 0 97.6 0 164 3 98 151 KRH93782.1 hypothetical protein M153_574000719 [Pseudoloma neurophilia] diamond 162 110 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;