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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA675638" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675638 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27808692 27808692 PRJNA675638_P_NODE_15944_length_180_cov_1.129771_g15747_i0 PRJNA675638 15944 180 1.129771 2.0335878 Engystomops pustulosus 76066 Chordata Chordata 55.8 3.77e-7   NR KAG8571490.1 76066 g15747 i0 63.9 33.5666666666667 36 13 60 0 178 71 1127 1162 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 6042 55.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
27966275 27966275 PRJNA675638_P_NODE_21425_length_162_cov_0.902655_g21228_i0 PRJNA675638 21425 162 0.902655 1.4623011 Tupaia chinensis 246437 Chordata Chordata 41.2 0.0215   NR ELW72024.1 246437 g21228 i0 72.4 0.537037037037037 29 8 53.7 0 157 71 13 41 ELW72024.1 60S ribosomal protein L7a [Tupaia chinensis] diamond 87 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Scandentia Tupaiidae Tupaia Tupaia chinensis
28345200 28345200 PRJNA675638_P_NODE_11286_length_210_cov_2.534161_g11089_i0 PRJNA675638 11286 210 2.534161 5.3217381 Staurois parvus 386267 Chordata Chordata 49.3 4.78e-6   NR CAI9622433.1 386267 g11089 i0 84.6 0.371428571428571 26 4 37.1 0 2 79 7 32 CAI9622433.1 unnamed protein product, partial [Staurois parvus] diamond 78 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
28534875 28534875 PRJNA675638_P_NODE_21067_length_163_cov_0.894737_g20870_i0 PRJNA675638 21067 163 0.894737 1.45842131 Balaenoptera physalus 9770 Chordata Chordata 48.1 1.61e-4   NR KAB0394805.1 9770 g20870 i0 62.9 0.644171779141104 35 13 64.4 0 32 136 411 445 KAB0394805.1 hypothetical protein E2I00_000632, partial [Balaenoptera physalus] diamond 105 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera physalus
29493691 29493691 PRJNA675638_S_NODE_6110_length_183_cov_1.873134_g6048_i0 PRJNA675638 6110 183 1.873134 3.42783522 Polypteridae 8289 Chordata Chordata 43.5 0.00921   NR XP_051788734.1 27687 g6048 i0 80 4.9344262295082 25 5 41 0 109 183 371 395 XP_051788734.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 903 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
29797500 29797500 PRJNA675638_S_NODE_7031_length_172_cov_1.658537_g6969_i0 PRJNA675638 7031 172 1.658537 2.85268364 Erpetoichthys calabaricus 27687 Chordata Chordata 58.2 4.89e-8   NR XP_051791274.1 27687 g6969 i0 73.2 3.57558139534884 41 10 69.8 1 53 172 156 196 XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus] diamond 615 58.2 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
29987178 29987178 PRJNA675638_P_NODE_17571_length_170_cov_1.619835_g17374_i0 PRJNA675638 17571 170 1.619835 2.7537195 Pleurodeles waltl 8319 Chordata Chordata 52 1.13e-6   NR KAJ1142759.1 8319 g17374 i0 46.9 9.68823529411765 49 26 86.5 0 148 2 45 93 KAJ1142759.1 hypothetical protein NDU88_009072, partial [Pleurodeles waltl] diamond 1647 52.4 0.99236641221374 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Salamandridae Pleurodeles Pleurodeles waltl
30271795 30271795 PRJNA675638_P_NODE_10172_length_220_cov_1.070175_g9975_i0 PRJNA675638 10172 220 1.070175 2.354385 Polypterus senegalus 55291 Chordata Chordata 72 9.87e-13   NR KAG2457453.1 55291 g9975 i0 48.7 1.06363636363636 78 31 96.8 2 5 217 123 198 KAG2457453.1 TCB1 transposase, partial [Polypterus senegalus] diamond 234 72 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
30650418 30650418 PRJNA675638_P_NODE_16293_length_178_cov_0.868217_g16096_i0 PRJNA675638 16293 178 0.868217 1.54542626 Camelus dromedarius 9838 Chordata Chordata 53.1 3.12e-6   NR KAB1282342.1 9838 g16096 i0 48.1 0.910112359550562 54 28 91 0 168 7 15 68 KAB1282342.1 Histone-lysine N-methyltransferase SETD7, partial [Camelus dromedarius] diamond 162 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Camelus Camelus dromedarius
30757270 30757270 PRJNA675638_P_NODE_8414_length_239_cov_0.989474_g8217_i0 PRJNA675638 8414 239 0.989474 2.36484286 Passeriformes 9126 Chordata Chordata 40.4 0.0495   NR NXF24574.1 58203 g8217 i0 64.3 0.677824267782427 28 10 35.1 0 228 145 26 53 NXF24574.1 ZFP2 protein [Rhodinocichla rosea] diamond 162 40.8 0.990196078431373 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Thraupidae Rhodinocichla Rhodinocichla rosea
30840240 30840240 PRJNA675638_S_NODE_6554_length_178_cov_0.930233_g6492_i0 PRJNA675638 6554 178 0.930233 1.65581474 Engystomops pustulosus 76066 Chordata Chordata 56.6 2.01e-7   NR KAG8571490.1 76066 g6492 i0 65.4 11.5112359550562 52 17 87.6 1 165 10 1044 1094 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 2049 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
31009971 31009971 PRJNA675638_P_NODE_14174_length_190_cov_1.446809_g13977_i0 PRJNA675638 14174 190 1.446809 2.7489371 Metazoa 33208 Chordata Chordata 53.9 1.87e-6   NR CAK8641272.1 30338 g13977 i0 56.1 2.06842105263158 41 18 64.7 0 190 68 233 273 CAK8641272.1 Retrovirus-related Pol polyprotein from transposon RE1 [Bufotes viridis] diamond 393 54.3 0.992633517495396 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
31314267 31314267 PRJNA675638_P_NODE_7215_length_256_cov_0.888889_g7018_i0 PRJNA675638 7215 256 0.888889 2.27555584 Neogale vison 452646 Chordata Chordata 45.1 0.00648   NR XP_044116080.1 452646 g7018 i0 47.1 0.8671875 34 18 39.8 0 28 129 337 370 XP_044116080.1 zinc finger protein 3-like [Neogale vison] diamond 222 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Neogale Neogale vison
31599118 31599118 PRJNA675638_P_NODE_20056_length_164_cov_0.886957_g19859_i0 PRJNA675638 20056 164 0.886957 1.45460948 Engystomops pustulosus 76066 Chordata Chordata 40.8 0.00973   NR KAG8584541.1 76066 g19859 i0 80 0.365853658536585 20 4 36.6 0 119 60 15 34 KAG8584541.1 hypothetical protein GDO81_004655 [Engystomops pustulosus] diamond 60 40.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
31820215 31820215 PRJNA675638_P_NODE_20477_length_164_cov_0.860870_g20280_i0 PRJNA675638 20477 164 0.86087 1.4118268 Polypterus senegalus 55291 Chordata Chordata 51.6 9.24e-6   NR KAG2460242.1 55291 g20280 i0 53.7 33.5853658536585 54 25 98.8 0 162 1 235 288 KAG2460242.1 TCB1 transposase, partial [Polypterus senegalus] diamond 5508 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
31895414 31895414 PRJNA675638_S_NODE_7637_length_167_cov_0.864407_g7575_i0 PRJNA675638 7637 167 0.864407 1.44355969 Metazoa 33208 Chordata Chordata 48.1 1.65e-4   NR XP_066845326.1 8845 g7575 i0 57.6 15.1077844311377 33 14 59.3 0 8 106 338 370 XP_066845326.1 LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 3-like [Anser cygnoides] diamond 2523 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Anseriformes Anatidae Anser Anser cygnoides
32073502 32073502 PRJNA675638_P_NODE_14898_length_186_cov_0.956204_g14701_i0 PRJNA675638 14898 186 0.956204 1.77853944 Staurois parvus 386267 Chordata Chordata 57.8 6.18e-9   NR CAI9547784.1 386267 g14701 i0 43.9 0.919354838709677 57 32 91.9 0 3 173 31 87 CAI9547784.1 unnamed protein product, partial [Staurois parvus] diamond 171 57.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
32200083 32200083 PRJNA675638_P_NODE_20118_length_164_cov_0.886957_g19921_i0 PRJNA675638 20118 164 0.886957 1.45460948 Bufotes viridis 30338 Chordata Chordata 42 0.0239   NR CAK8629749.1 30338 g19921 i0 50 1.44512195121951 42 21 76.8 0 144 19 323 364 CAK8629749.1 Interleukin-1 receptor type 1 [Bufotes viridis] diamond 237 42 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
32705460 32705460 PRJNA675638_P_NODE_20560_length_163_cov_1.789474_g20363_i0 PRJNA675638 20560 163 1.789474 2.91684262 Staurois parvus 386267 Chordata Chordata 53.1 4.07e-7   NR CAI9557087.1 386267 g20363 i0 63.9 1.32515337423313 36 11 62.6 1 117 16 24 59 CAI9557087.1 unnamed protein product, partial [Staurois parvus] diamond 216 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;