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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA675638" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675638 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26670146 26670146 PRJNA675638_S_NODE_7841_length_166_cov_0.871795_g7779_i0 PRJNA675638 7841 166 0.871795 1.4471797 Hymenobacter guriensis 2793065 Bacteria Bacteria 47.8 2.24e-4   NR WP_196954087.1 2793065 g7779 i0 52.6 0.686746987951807 38 18 68.7 0 1 114 295 332 WP_196954087.1 GIY-YIG nuclease family protein, partial [Hymenobacter guriensis] diamond 114 47.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter guriensis
26797123 26797123 PRJNA675638_P_NODE_6241_length_274_cov_1.360000_g6044_i0 PRJNA675638 6241 274 1.36 3.7264 Bacteroidota bacterium 1898104 Bacteria Bacteria 58.5 1.04e-7   NR RLD76804.1 1898104 g6044 i0 55.8 0.569343065693431 52 23 56.9 0 256 101 133 184 RLD76804.1 MAG: hypothetical protein DRJ15_14725 [Bacteroidota bacterium] diamond 156 58.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27113361 27113361 PRJNA675638_S_NODE_3302_length_239_cov_0.805263_g3240_i0 PRJNA675638 3302 239 0.805263 1.92457857 Bacteroidia bacterium 2044936 Bacteria Bacteria 43.1 0.0265   NR MBT8260500.1 2044936 g3240 i0 45 0.502092050209205 40 22 50.2 0 154 35 28 67 MBT8260500.1 caspase family protein [Bacteroidia bacterium] diamond 120 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
27334948 27334948 PRJNA675638_P_NODE_15743_length_181_cov_1.318182_g15546_i0 PRJNA675638 15743 181 1.318182 2.38590942 Mucilaginibacter sp. 1882438 Bacteria Bacteria 61.2 2.07e-9   NR HTE01451.1 1882438 g15546 i0 54.9 3.38121546961326 51 23 84.5 0 29 181 1 51 HTE01451.1 TerD family protein [Mucilaginibacter sp.] diamond 612 61.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter sp.
27461287 27461287 PRJNA675638_P_NODE_18443_length_167_cov_0.864407_g18246_i0 PRJNA675638 18443 167 0.864407 1.44355969 Epilithonimonas sp. 2894511 Bacteria Bacteria 43.1 0.00422   NR WP_333853877.1 2894511 g18246 i0 51.8 1.0059880239521 56 22 91.6 2 164 12 17 72 WP_333853877.1 hypothetical protein [Epilithonimonas sp.] diamond 168 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Epilithonimonas Epilithonimonas sp.
27524317 27524317 PRJNA675638_S_NODE_3923_length_220_cov_0.894737_g3861_i0 PRJNA675638 3923 220 0.894737 1.9684214 Tenacibaculum discolor 361581 Bacteria Bacteria 50.8 7.07e-6   NR WP_141554308.1 361581 g3861 i0 92 0.340909090909091 25 2 34.1 0 220 146 94 118 WP_141554308.1 helix-turn-helix domain-containing protein, partial [Tenacibaculum discolor] diamond 75 50.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum Tenacibaculum discolor
27555661 27555661 PRJNA675638_S_NODE_5984_length_185_cov_1.500000_g5922_i0 PRJNA675638 5984 185 1.5 2.775 Spirosoma arboris 2682092 Bacteria Bacteria 43.1 0.00208   NR WP_157590876.1 2682092 g5922 i0 46.8 0.762162162162162 47 24 74.6 1 140 3 8 54 WP_157590876.1 hypothetical protein [Spirosoma arboris] diamond 141 43.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Spirosoma Spirosoma arboris
27619131 27619131 PRJNA675638_P_NODE_21384_length_162_cov_0.902655_g21187_i0 PRJNA675638 21384 162 0.902655 1.4623011 Aurantibacillus circumpalustris 3036359 Bacteria Bacteria 79 2.09e-15   NR WP_317898393.1 3036359 g21187 i0 64.8 1 54 18 98.1 1 160 2 563 616 WP_317898393.1 M1 family metallopeptidase [Aurantibacillus circumpalustris] diamond 162 79 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Aurantibacillaceae Aurantibacillus Aurantibacillus circumpalustris
27820414 27820414 PRJNA675638_S_NODE_7624_length_167_cov_0.864407_g7562_i0 PRJNA675638 7624 167 0.864407 1.44355969 Bacteria 2 Bacteria Bacteria 60.5 7.34e-9   NR MCW3104830.1 1898104 g7562 i0 66.7 1.50898203592814 42 14 75.4 0 165 40 471 512 MCW3104830.1 putative nicotinate phosphoribosyltransferase [Bacteroidota bacterium] diamond 252 60.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27883344 27883344 PRJNA675638_P_NODE_625_length_837_cov_1.409898_g497_i0 PRJNA675638 625 837 1.409898 11.80084626 root 1 Root_unresolved Root_unresolved 61.2 4.31e-8   NR MFA6199055.1 2030927 g497 i0 36.8 1.49820788530466 87 53 30.5 1 614 360 3 89 MFA6199055.1 hypothetical protein [Bacteroidales bacterium] diamond 1254 61.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
27946553 27946553 PRJNA675638_P_NODE_11685_length_207_cov_1.955696_g11488_i0 PRJNA675638 11685 207 1.955696 4.04829072 root 1 Root_unresolved Root_unresolved 83.6 8.58e-17   NR MEY4331583.1 1898104 g11488 i0 60.9 2 69 24 98.6 2 205 2 403 469 MEY4331583.1 Ralstonia phage [Bacteroidota bacterium] diamond 414 84.3 0.991696322657177 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28376719 28376719 PRJNA675638_P_NODE_12526_length_201_cov_1.993421_g12329_i0 PRJNA675638 12526 201 1.993421 4.00677621 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 57.4 2.43e-8   NR WP_288980320.1 165435 g12329 i0 47 0.985074626865672 66 35 98.5 0 2 199 40 105 WP_288980320.1 NADAR family protein [uncultured Flavobacterium sp.] diamond 198 57.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
28408418 28408418 PRJNA675638_P_NODE_18886_length_166_cov_0.871795_g18689_i0 PRJNA675638 18886 166 0.871795 1.4471797 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 45.4 0.00143   NR WP_288980199.1 165435 g18689 i0 46.2 0.939759036144578 52 24 94 2 164 9 24 71 WP_288980199.1 RNA ligase family protein [uncultured Flavobacterium sp.] diamond 156 45.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
28818500 28818500 PRJNA675638_P_NODE_14148_length_190_cov_1.808511_g13951_i0 PRJNA675638 14148 190 1.808511 3.4361709 Spirosoma arboris 2682092 Bacteria Bacteria 52.4 5.19e-7   NR WP_157590876.1 2682092 g13951 i0 41.9 0.978947368421053 62 35 96.3 1 183 1 4 65 WP_157590876.1 hypothetical protein [Spirosoma arboris] diamond 186 52.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Spirosoma Spirosoma arboris
29670991 29670991 PRJNA675638_S_NODE_5350_length_195_cov_1.397260_g5288_i0 PRJNA675638 5350 195 1.39726 2.724657 Haliscomenobacter sp. 2717303 Bacteria Bacteria 58.5 5.15e-8   NR WP_353479878.1 2717303 g5288 i0 63.8 0.723076923076923 47 17 72.3 0 142 2 283 329 WP_353479878.1 hypothetical protein [Haliscomenobacter sp.] diamond 141 58.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Haliscomenobacteraceae Haliscomenobacter Haliscomenobacter sp.
30050170 30050170 PRJNA675638_P_NODE_4251_length_325_cov_2.561594_g4054_i0 PRJNA675638 4251 325 2.561594 8.3251805 Flavobacterium sp. 239 Bacteria Bacteria 90.1 1.66e-18   NR WP_300099683.1 239 g4054 i0 46.2 0.978461538461538 106 53 97.8 1 4 321 60 161 WP_300099683.1 hypothetical protein [Flavobacterium sp.] diamond 318 90.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
30176636 30176636 PRJNA675638_P_NODE_19752_length_165_cov_0.879310_g19555_i0 PRJNA675638 19752 165 0.87931 1.4508615 Chitinophagales bacterium 2448779 Bacteria Bacteria 41.2 0.0452   NR MBA3647150.1 2448779 g19555 i0 30.2 0.963636363636364 53 34 96.4 2 163 5 141 190 MBA3647150.1 T9SS type A sorting domain-containing protein [Chitinophagales bacterium] diamond 159 41.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
30303562 30303562 PRJNA675638_P_NODE_16572_length_176_cov_1.606299_g16375_i0 PRJNA675638 16572 176 1.606299 2.82708624 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 119 1.29e-32   NR HCO20144.1 1871037 g16375 i0 100 0.988636363636364 58 0 98.9 0 174 1 89 146 HCO20144.1 hypothetical protein [Flavobacteriaceae bacterium] diamond 174 119 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
30618979 30618979 PRJNA675638_P_NODE_11373_length_210_cov_0.950311_g11176_i0 PRJNA675638 11373 210 0.950311 1.9956531 Flavobacterium sp. 239 Bacteria Bacteria 42.4 0.0337   NR WP_300099683.1 239 g11176 i0 34.3 1 70 43 95.7 2 1 201 248 317 WP_300099683.1 hypothetical protein [Flavobacterium sp.] diamond 210 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
30618982 30618982 PRJNA675638_S_NODE_3373_length_236_cov_1.657754_g3311_i0 PRJNA675638 3373 236 1.657754 3.91229944 Chitinophaga pollutisoli 3133966 Bacteria Bacteria 44.7 0.00637   NR WP_341837148.1 3133966 g3311 i0 47.2 0.457627118644068 36 19 45.8 0 207 100 136 171 WP_341837148.1 hypothetical protein [Chitinophaga pollutisoli] diamond 108 44.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Chitinophaga Chitinophaga pollutisoli
30966772 30966772 PRJNA675638_P_NODE_4754_length_309_cov_1.176923_g4557_i0 PRJNA675638 4754 309 1.176923 3.63669207 Paludibacter jiangxiensis 681398 Bacteria Bacteria 45.1 0.00292   NR WP_068704850.1 681398 g4557 i0 43.5 0.446601941747573 46 24 44.7 2 268 131 2 45 WP_068704850.1 hypothetical protein [Paludibacter jiangxiensis] diamond 138 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae Paludibacter Paludibacter jiangxiensis
30966773 30966773 PRJNA675638_P_NODE_7594_length_250_cov_1.268657_g7397_i0 PRJNA675638 7594 250 1.268657 3.1716425 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 45.8 0.00255   NR WP_288980258.1 165435 g7397 i0 32.2 0.708 59 39 70.8 1 183 7 151 208 WP_288980258.1 hypothetical protein [uncultured Flavobacterium sp.] diamond 177 45.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
31218996 31218996 PRJNA675638_P_NODE_14915_length_186_cov_0.773723_g14718_i0 PRJNA675638 14915 186 0.773723 1.43912478 Bacteroidota bacterium 1898104 Bacteria Bacteria 47 5.52e-4   NR MBP1678042.1 1898104 g14718 i0 39.1 0.741935483870968 46 28 74.2 0 143 6 186 231 MBP1678042.1 ribonucleoside-diphosphate reductase [Bacteroidota bacterium] diamond 138 47 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
31345992 31345992 PRJNA675638_S_NODE_8676_length_163_cov_0.894737_g8614_i0 PRJNA675638 8676 163 0.894737 1.45842131 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 95.1 4.52e-21   NR MFN8270874.1 1869212 g8614 i0 83.7 1.78527607361963 49 8 90.2 0 16 162 789 837 MFN8270874.1 TonB-dependent receptor [Chitinophagaceae bacterium] diamond 291 95.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31472574 31472574 PRJNA675638_P_NODE_21556_length_162_cov_0.902655_g21359_i0 PRJNA675638 21556 162 0.902655 1.4623011 Chryseobacterium echinoideorum 1549648 Bacteria Bacteria 110 1.91e-28   NR WP_144281094.1 1549648 g21359 i0 96.2 1.96296296296296 53 2 98.1 0 161 3 87 139 WP_144281094.1 restriction endonuclease [Chryseobacterium echinoideorum] diamond 318 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium echinoideorum
31504218 31504218 PRJNA675638_P_NODE_7796_length_247_cov_1.030303_g7599_i0 PRJNA675638 7796 247 1.030303 2.54484841 Bacteroidales bacterium 2030927 Bacteria Bacteria 87 5.1e-20   NR MFA6198864.1 2030927 g7599 i0 62.1 0.801619433198381 66 25 80.2 0 47 244 37 102 MFA6198864.1 hypothetical protein [Bacteroidales bacterium] diamond 198 87 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
31567550 31567550 PRJNA675638_P_NODE_19656_length_165_cov_0.879310_g19459_i0 PRJNA675638 19656 165 0.87931 1.4508615 Dysgonomonas mossii 163665 Bacteria Bacteria 87.8 1.76e-18   NR WP_006844447.1 163665 g19459 i0 89.1 1 55 3 100 1 165 1 829 880 WP_006844447.1 type I polyketide synthase [Dysgonomonas mossii] diamond 165 87.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Dysgonomonadaceae Dysgonomonas Dysgonomonas mossii
31662010 31662010 PRJNA675638_P_NODE_12457_length_202_cov_1.000000_g12260_i0 PRJNA675638 12457 202 1 2.02 Muribaculaceae bacterium 2498093 Bacteria Bacteria 57.8 2.9e-8   NR MDE7381621.1 2498093 g12260 i0 43.4 1.12871287128713 76 32 98 2 200 3 31 105 MDE7381621.1 dihydrofolate reductase [Muribaculaceae bacterium] diamond 228 57.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae   Muribaculaceae bacterium
31883528 31883528 PRJNA675638_P_NODE_20617_length_163_cov_1.342105_g20420_i0 PRJNA675638 20617 163 1.342105 2.18763115 Bacteroidales bacterium 2030927 Bacteria Bacteria 67.8 1.21e-11   NR MFA6198909.1 2030927 g20420 i0 65 2.83435582822086 40 14 73.6 0 42 161 4 43 MFA6198909.1 hypothetical protein [Bacteroidales bacterium] diamond 462 67.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
32263585 32263585 PRJNA675638_P_NODE_9858_length_223_cov_0.879310_g9661_i0 PRJNA675638 9858 223 0.87931 1.9608613 Haliscomenobacter sp. 2717303 Bacteria Bacteria 58.5 7.74e-8   NR WP_353479878.1 2717303 g9661 i0 63.8 0.632286995515695 47 17 63.2 0 82 222 283 329 WP_353479878.1 hypothetical protein [Haliscomenobacter sp.] diamond 141 58.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Haliscomenobacteraceae Haliscomenobacter Haliscomenobacter sp.
32516685 32516685 PRJNA675638_P_NODE_14579_length_188_cov_1.100719_g14382_i0 PRJNA675638 14579 188 1.100719 2.06935172 Chitinophagales bacterium 2448779 Bacteria Bacteria 42.7 0.00171   NR HMU99094.1 2448779 g14382 i0 44.2 0.829787234042553 52 29 83 0 9 164 1 52 HMU99094.1 hypothetical protein [Chitinophagales bacterium] diamond 156 42.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
32579835 32579835 PRJNA675638_S_NODE_7639_length_167_cov_0.864407_g7577_i0 PRJNA675638 7639 167 0.864407 1.44355969 Kaistella montana 1849733 Bacteria Bacteria 114 2.27e-29   NR WP_255930536.1 1849733 g7577 i0 96.4 0.988023952095808 55 2 98.8 0 2 166 58 112 WP_255930536.1 molecular chaperone [Kaistella montana] diamond 165 114 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Kaistella Kaistella montana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;