contig_metadata
13 rows where analysis = "diamond", bioproject = "PRJNA675331" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1923829 | 1923829 | PRJNA675331_P_NODE_14302_length_275_cov_1.232673_g14130_i0 | PRJNA675331 | 14302 | 275 | 1.232673 | 3.38985075 | Bacteria | 2 | Bacteria | Bacteria | 126 | 2.31e-32 | NR | NLK69503.1 | 1898204 | g14130 | i0 | 63.3 | 16.5927272727273 | 90 | 33 | 98.2 | 0 | 4 | 273 | 303 | 392 | NLK69503.1 elongation factor Tu [Clostridiaceae bacterium] | diamond | 4563 | 127 | 0.992125984251969 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridiaceae bacterium | |||
| 15950529 | 15950529 | PRJNA675331_P_NODE_4813_length_435_cov_1.063536_g4641_i0 | PRJNA675331 | 4813 | 435 | 1.063536 | 4.6263816 | Evansella vedderi | 38282 | Bacteria | Bacteria | 261 | 1.34e-81 | NR | WP_307329272.1 | 38282 | g4641 | i0 | 81.9 | 0.993103448275862 | 144 | 26 | 99.3 | 0 | 434 | 3 | 244 | 387 | WP_307329272.1 beta-glucuronidase [Evansella vedderi] | diamond | 432 | 261 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Evansella | Evansella vedderi | ||
| 15950548 | 15950548 | PRJNA675331_P_NODE_9253_length_325_cov_1.142857_g9081_i0 | PRJNA675331 | 9253 | 325 | 1.142857 | 3.71428525 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 162 | 2.11e-46 | NR | MDD4685958.1 | 2044939 | g9081 | i0 | 79 | 47.4830769230769 | 105 | 22 | 96.9 | 0 | 324 | 10 | 154 | 258 | MDD4685958.1 type I glyceraldehyde-3-phosphate dehydrogenase [Clostridia bacterium] | diamond | 15432 | 162 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 27239880 | 27239880 | PRJNA675331_P_NODE_20003_length_248_cov_0.880000_g19831_i0 | PRJNA675331 | 20003 | 248 | 0.88 | 2.1824 | Clostridiales bacterium | 1898207 | Bacteria | Bacteria | 64.3 | 2.16e-11 | NR | HBV66938.1 | 1898207 | g19831 | i0 | 46.7 | 0.725806451612903 | 60 | 32 | 72.6 | 0 | 229 | 50 | 17 | 76 | HBV66938.1 hypothetical protein [Clostridiales bacterium] | diamond | 180 | 64.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 28293757 | 28293757 | PRJNA675331_P_NODE_4586_length_444_cov_1.326146_g4414_i0 | PRJNA675331 | 4586 | 444 | 1.326146 | 5.88808824 | root | 1 | Root_unresolved | Root_unresolved | 162 | 7.64e-46 | NR | MRB67411.1 | 1428 | g4414 | i0 | 59.4 | 5.40540540540541 | 133 | 47 | 89.9 | 1 | 401 | 3 | 5 | 130 | MRB67411.1 30S ribosomal protein S2 [Bacillus thuringiensis] | diamond | 2400 | 163 | 0.993865030674847 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 28408406 | 28408406 | PRJNA675331_P_NODE_19326_length_249_cov_0.875000_g19154_i0 | PRJNA675331 | 19326 | 249 | 0.875 | 2.17875 | Oribacterium sinus | 237576 | Bacteria | Bacteria | 92 | 1.84e-19 | NR | WP_304070818.1 | 237576 | g19154 | i0 | 53 | 1.98795180722892 | 83 | 39 | 100 | 0 | 1 | 249 | 153 | 235 | WP_304070818.1 methyl-accepting chemotaxis protein [Oribacterium sinus] | diamond | 495 | 92 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Oribacterium | Oribacterium sinus | ||
| 28724132 | 28724132 | PRJNA675331_P_NODE_10527_length_308_cov_2.034043_g10355_i0 | PRJNA675331 | 10527 | 308 | 2.034043 | 6.26485244 | Veillonella sp. | 1926307 | Bacteria | Bacteria | 156 | 2.9e-47 | NR | WP_366512514.1 | 1926307 | g10355 | i0 | 73 | 1.94805194805195 | 100 | 27 | 97.4 | 0 | 306 | 7 | 6 | 105 | WP_366512514.1 hypothetical protein [Veillonella sp.] | diamond | 600 | 156 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella sp. | ||
| 31218986 | 31218986 | PRJNA675331_P_NODE_13035_length_283_cov_1.114286_g12863_i0 | PRJNA675331 | 13035 | 283 | 1.114286 | 3.15342938 | Evansella sp. LMS18 | 2924033 | Bacteria | Bacteria | 44.3 | 0.0172 | NR | WP_255244507.1 | 2924033 | g12863 | i0 | 33.8 | 0.816254416961131 | 77 | 51 | 81.6 | 0 | 4 | 234 | 325 | 401 | WP_255244507.1 asparagine synthase-related protein [Evansella sp. LMS18] | diamond | 231 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Evansella | Evansella sp. LMS18 | ||
| 31326014 | 31326014 | PRJNA675331_P_NODE_16255_length_263_cov_1.215789_g16083_i0 | PRJNA675331 | 16255 | 263 | 1.215789 | 3.19752507 | Bacillati | 1783272 | Bacteria | Bacteria | 43.5 | 0.0252 | NR | WP_010246532.1 | 35830 | g16083 | i0 | 37.9 | 1.6425855513308 | 66 | 37 | 73 | 2 | 69 | 260 | 213 | 276 | WP_010246532.1 hypothetical protein [Acetivibrio cellulolyticus] | diamond | 432 | 43.9 | 0.990888382687927 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Acetivibrio | Acetivibrio cellulolyticus | ||
| 31958628 | 31958628 | PRJNA675331_P_NODE_8617_length_335_cov_0.881679_g8445_i0 | PRJNA675331 | 8617 | 335 | 0.881679 | 2.95362465 | Bacillati | 1783272 | Bacteria | Bacteria | 111 | 7.090000000000001e-26 | NR | MEE3392634.1 | 1898203 | g8445 | i0 | 55.6 | 4.38805970149254 | 81 | 36 | 72.5 | 0 | 243 | 1 | 6 | 86 | MEE3392634.1 glutamine synthetase III [Lachnospiraceae bacterium] | diamond | 1470 | 111 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 32041836 | 32041836 | PRJNA675331_P_NODE_1778_length_685_cov_1.570261_g1617_i0 | PRJNA675331 | 1778 | 685 | 1.570261 | 10.75628785 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 47.4 | 0.0393 | NR | MBQ3461596.1 | 2044939 | g1617 | i0 | 26.9 | 2.19416058394161 | 167 | 109 | 67.9 | 4 | 475 | 11 | 4766 | 4931 | MBQ3461596.1 cadherin-like beta sandwich domain-containing protein [Clostridia bacterium] | diamond | 1503 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32105037 | 32105037 | PRJNA675331_P_NODE_7118_length_364_cov_1.054983_g6946_i0 | PRJNA675331 | 7118 | 364 | 1.054983 | 3.84013812 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 47 | 0.00446 | NR | MBO5336739.1 | 1898203 | g6946 | i0 | 30.6 | 0.593406593406593 | 72 | 50 | 59.3 | 0 | 93 | 308 | 404 | 475 | MBO5336739.1 glucosyltransferase domain-containing protein [Lachnospiraceae bacterium] | diamond | 216 | 47 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 32799878 | 32799878 | PRJNA675331_P_NODE_23620_length_242_cov_0.911243_g23448_i0 | PRJNA675331 | 23620 | 242 | 0.911243 | 2.20520806 | Staphylococcus aureus | 1280 | Bacteria | Bacteria | 56.2 | 3.96e-7 | NR | WP_275218940.1 | 1280 | g23448 | i0 | 84.6 | 0.322314049586777 | 26 | 4 | 32.2 | 0 | 186 | 109 | 3 | 28 | WP_275218940.1 hypothetical protein, partial [Staphylococcus aureus] | diamond | 78 | 56.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;