RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA675331" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Nanobdellati · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA675331 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25394913 25394913 PRJNA675331_P_NODE_10940_length_304_cov_1.000000_g10768_i0 PRJNA675331 10940 304 1 3.04 root 1 Root_unresolved Root_unresolved 147 1.33e-40   NR MBI2573596.1 2026803 g10768 i0 67 16.8157894736842 100 33 98.7 0 303 4 218 317 MBI2573596.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [Candidatus Woesearchaeota archaeon] diamond 5112 147 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
27524303 27524303 PRJNA675331_P_NODE_23123_length_242_cov_2.414201_g22951_i0 PRJNA675331 23123 242 2.414201 5.84236642 Candidatus Pacearchaeota archaeon RBG_16_35_8 1801882 Archaea Archaea 57 3.32e-7   NR OGJ11970.1 1801882 g22951 i0 50.8 0.756198347107438 61 25 75.6 3 53 235 271 326 OGJ11970.1 MAG: hypothetical protein A3K62_02875 [Candidatus Pacearchaeota archaeon RBG_16_35_8] diamond 183 57 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon RBG_16_35_8
31452748 31452748 PRJNA675331_P_NODE_8636_length_334_cov_1.931034_g8464_i0 PRJNA675331 8636 334 1.931034 6.44965356 root 1 Root_unresolved Root_unresolved 65.9 8.26e-10   NR HDP73556.1 2026803 g8464 i0 66.7 2.58682634730539 39 13 35 0 318 202 148 186 HDP73556.1 DUF4215 domain-containing protein [Candidatus Woesearchaeota archaeon] diamond 864 66.2 0.995468277945619 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;