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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA675331" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 9 ✖

bioproject 1

  • PRJNA675331 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6272471 6272471 PRJNA675331_P_NODE_17445_length_254_cov_2.751381_g17273_i0 PRJNA675331 17445 254 2.751381 6.98850774 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 117 5.750000000000001e-29   NR XP_013753861.1 461836 g17273 i0 56 0.992125984251969 84 37 99.2 0 2 253 51 134 XP_013753861.1 protein disulfide isomerase A [Thecamonas trahens ATCC 50062] diamond 252 117 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
8301096 8301096 PRJNA675331_P_NODE_18827_length_250_cov_0.870056_g18655_i0 PRJNA675331 18827 250 0.870056 2.17514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 129 1.9299999999999998e-32   NR XP_013758235.1 461836 g18655 i0 76.8 15.744 82 19 98.4 0 248 3 888 969 XP_013758235.1 uncharacterized protein AMSG_11856 [Thecamonas trahens ATCC 50062] diamond 3936 130 0.992307692307692 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28881881 28881881 PRJNA675331_P_NODE_13768_length_277_cov_1.343137_g13596_i0 PRJNA675331 13768 277 1.343137 3.72048949 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.1 1.19e-18   NR XP_013758370.1 461836 g13596 i0 46.7 0.974729241877256 90 48 97.5 0 4 273 49 138 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 270 85.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29134804 29134804 PRJNA675331_P_NODE_3869_length_478_cov_1.711111_g3697_i0 PRJNA675331 3869 478 1.711111 8.17911058 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 82.8 1.37e-16   NR XP_013753243.1 461836 g3697 i0 30.7 0.941422594142259 150 101 92.3 2 7 447 12 161 XP_013753243.1 uncharacterized protein AMSG_10809 [Thecamonas trahens ATCC 50062] diamond 450 82.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29525386 29525386 PRJNA675331_P_NODE_1570_length_727_cov_1.353211_g1410_i0 PRJNA675331 1570 727 1.353211 9.83784397 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 207 6.75e-62   NR XP_013755573.1 461836 g1410 i0 47.8 4.48968363136176 205 106 84.2 1 68 679 122 326 XP_013755573.1 cysteine protease CP19 [Thecamonas trahens ATCC 50062] diamond 3264 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29714340 29714340 PRJNA675331_P_NODE_24410_length_237_cov_2.347561_g24238_i0 PRJNA675331 24410 237 2.347561 5.56371957 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 149 1.45e-39   NR XP_013762907.1 461836 g24238 i0 88.5 2.9620253164557 78 9 98.7 0 236 3 393 470 XP_013762907.1 elongation factor 2 [Thecamonas trahens ATCC 50062] diamond 702 149 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31800297 31800297 PRJNA675331_P_NODE_2297_length_608_cov_1.833645_g2131_i0 PRJNA675331 2297 608 1.833645 11.1485616 root 1 Root_unresolved Root_unresolved 213 2.91e-64   NR XP_013757656.1 461836 g2131 i0 50.7 2.99506578947368 201 98 99.2 1 6 608 104 303 XP_013757656.1 NAD-dependent epimerase/dehydratase [Thecamonas trahens ATCC 50062] diamond 1821 213 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32073489 32073489 PRJNA675331_P_NODE_21598_length_245_cov_0.895349_g21426_i0 PRJNA675331 21598 245 0.895349 2.19360505 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 1.84e-9   NR XP_013754951.1 461836 g21426 i0 51.9 0.942857142857143 77 34 90.6 2 240 19 3155 3231 XP_013754951.1 uncharacterized protein AMSG_08995 [Thecamonas trahens ATCC 50062] diamond 231 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32799876 32799876 PRJNA675331_P_NODE_22660_length_243_cov_0.905882_g22488_i0 PRJNA675331 22660 243 0.905882 2.20129326 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 46.6 0.00173   NR XP_013757898.1 461836 g22488 i0 37.3 0.925925925925926 75 43 90.1 2 25 243 3083 3155 XP_013757898.1 uncharacterized protein AMSG_05495 [Thecamonas trahens ATCC 50062] diamond 225 46.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;