contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA675042" and tax_phylum = "Deinococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26638654 | 26638654 | PRJNA675042_P_NODE_45261_length_333_cov_0.976923_g44811_i0 | PRJNA675042 | 45261 | 333 | 0.976923 | 3.25315359 | Thermus oshimai | 56957 | Bacteria | Bacteria | 91.7 | 1.04e-20 | NR | GAA6742159.1 | 56957 | g44811 | i0 | 60.6 | 0.846846846846847 | 94 | 30 | 78.4 | 1 | 333 | 73 | 29 | 122 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 282 | 91.7 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 26935499 | 26935499 | PRJNA675042_P_NODE_89882_length_269_cov_1.326531_g89432_i0 | PRJNA675042 | 89882 | 269 | 1.326531 | 3.56836839 | root | 1 | Root_unresolved | Root_unresolved | 47.8 | 3.99e-4 | NR | GAA6742159.1 | 56957 | g89432 | i0 | 44.4 | 0.947955390334573 | 54 | 30 | 60.2 | 0 | 225 | 64 | 16 | 69 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 255 | 47.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 30840183 | 30840183 | PRJNA675042_P_NODE_434_length_1914_cov_8.552960_g8_i19 | PRJNA675042 | 434 | 1914 | 8.55296 | 163.7036544 | Thermus oshimai | 56957 | Bacteria | Bacteria | 100 | 1.55e-20 | NR | GAA6742159.1 | 56957 | g8 | i19 | 55.1 | 0.184952978056426 | 118 | 53 | 18.5 | 0 | 868 | 1221 | 42 | 159 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 354 | 100 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 31250881 | 31250881 | PRJNA675042_P_NODE_146475_length_246_cov_0.878613_g146025_i0 | PRJNA675042 | 146475 | 246 | 0.878613 | 2.16138798 | Thermus oshimai | 56957 | Bacteria | Bacteria | 52.8 | 3.86e-6 | NR | GAA6742159.1 | 56957 | g146025 | i0 | 64.7 | 0.414634146341463 | 34 | 12 | 41.5 | 0 | 15 | 116 | 1 | 34 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 102 | 52.8 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 32104939 | 32104939 | PRJNA675042_P_NODE_1218_length_1183_cov_10.077477_g8_i24 | PRJNA675042 | 1218 | 1183 | 10.077477 | 119.21655291 | Thermus oshimai | 56957 | Bacteria | Bacteria | 125 | 2.26e-30 | NR | GAA6742159.1 | 56957 | g8 | i24 | 53.3 | 0.385460693153001 | 152 | 64 | 36.8 | 1 | 56 | 490 | 8 | 159 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 456 | 125 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai | ||
| 32295265 | 32295265 | PRJNA675042_P_NODE_2059_length_928_cov_9.189474_g1707_i0 | PRJNA675042 | 2059 | 928 | 9.189474 | 85.27831872 | Thermus oshimai | 56957 | Bacteria | Bacteria | 99.4 | 2.54e-21 | NR | GAA6742159.1 | 56957 | g1707 | i0 | 67.4 | 0.517241379310345 | 95 | 24 | 28.4 | 1 | 154 | 417 | 28 | 122 | GAA6742159.1 hypothetical protein Thermus77359_23470 [Thermus oshimai] | diamond | 480 | 99.4 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus oshimai |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;