RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA675042" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675042 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27946528 27946528 PRJNA675042_P_NODE_135845_length_247_cov_0.885057_g135395_i0 PRJNA675042 135845 247 0.885057 2.18609079 Metazoa 33208 Annelida Annelida 47.4 8.84e-4   NR KAK2173978.1 27915 g135395 i0 36.9 1.50607287449393 65 41 78.9 0 196 2 125 189 KAK2173978.1 hypothetical protein NP493_838g02000 [Ridgeia piscesae] diamond 372 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
28262104 28262104 PRJNA675042_P_NODE_92366_length_266_cov_1.595855_g91916_i0 PRJNA675042 92366 266 1.595855 4.2449743 root 1 Root_unresolved Root_unresolved 59.7 4.51e-8   NR ELU11326.1 283909 g91916 i0 55.6 4.01503759398496 54 24 60.9 0 18 179 122 175 ELU11326.1 hypothetical protein CAPTEDRAFT_210610 [Capitella teleta] diamond 1068 60.1 0.993344425956739 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;