RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA674308" and tax_phylum = "Discosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Discosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA674308 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
644482 644482 PRJNA674308_P_NODE_11081_length_287_cov_1.747899_g10846_i0 PRJNA674308 11081 287 1.747899 5.01647013 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 150 6.22e-41   NR XP_004341068.1 1257118 g10846 i0 74.7 32.6655052264808 95 23 99.3 1 2 286 22 115 XP_004341068.1 polyadenylate-binding protein family protein [Acanthamoeba castellanii str. Neff] diamond 9375 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7023619 7023619 PRJNA674308_P_NODE_8266_length_331_cov_1.677305_g8031_i0 PRJNA674308 8266 331 1.677305 5.55187955 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 162 8.58e-44   NR XP_004337289.1 1257118 g8031 i0 66.1 7.90332326283988 109 36 98.8 1 329 3 533 640 XP_004337289.1 eukaryotic translation elongation factor 2, putative [Acanthamoeba castellanii str. Neff] diamond 2616 162 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8819659 8819659 PRJNA674308_P_NODE_32367_length_178_cov_1.209302_g32132_i0 PRJNA674308 32367 178 1.209302 2.15255756 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.7 2.82e-10   NR XP_004352763.1 1257118 g32132 i0 58.5 1.82022471910112 53 19 84.3 1 2 151 603 655 XP_004352763.1 Dual specificity protein kinase [Acanthamoeba castellanii str. Neff] diamond 324 64.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14673782 14673782 PRJNA674308_P_NODE_3312_length_531_cov_2.997925_g3080_i0 PRJNA674308 3312 531 2.997925 15.91898175 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 175 1.97e-50   NR XP_004368288.1 1257118 g3080 i0 53.5 2.04519774011299 185 74 99.4 6 3 530 134 315 XP_004368288.1 cysteine proteinase precursor, putative [Acanthamoeba castellanii str. Neff] diamond 1086 175 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26860626 26860626 PRJNA674308_P_NODE_28141_length_190_cov_1.106383_g27906_i0 PRJNA674308 28141 190 1.106383 2.1021277 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 7.969999999999999e-23   NR XP_004341646.1 1257118 g27906 i0 68.3 0.994736842105263 63 20 99.5 0 189 1 266 328 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 189 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26923654 26923654 PRJNA674308_P_NODE_28442_length_189_cov_1.157143_g28207_i0 PRJNA674308 28442 189 1.157143 2.18700027 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.3 4.53e-10   NR XP_004348715.1 1257118 g28207 i0 48.4 1.01587301587302 64 32 100 1 189 1 229 292 XP_004348715.1 AMPbinding enzyme domain containing protein [Acanthamoeba castellanii str. Neff] diamond 192 64.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27239737 27239737 PRJNA674308_P_NODE_30163_length_184_cov_1.237037_g29928_i0 PRJNA674308 30163 184 1.237037 2.27614808 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62.8 1.45e-9   NR XP_004342263.1 1257118 g29928 i0 44.1 0.96195652173913 59 33 96.2 0 2 178 228 286 XP_004342263.1 dipeptidyl-peptidase family protein [Acanthamoeba castellanii str. Neff] diamond 177 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27429683 27429683 PRJNA674308_P_NODE_26763_length_194_cov_1.179310_g26528_i0 PRJNA674308 26763 194 1.17931 2.2878614 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67 3.63e-11   NR XP_004353045.1 1257118 g26528 i0 47.5 0.943298969072165 61 32 94.3 0 187 5 237 297 XP_004353045.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 183 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27966125 27966125 PRJNA674308_P_NODE_1725_length_767_cov_1.440111_g1524_i0 PRJNA674308 1725 767 1.440111 11.04565137 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 94.7 1.77e-18   NR XP_004339240.1 1257118 g1524 i0 63 3.06649282920469 73 27 28.6 0 533 751 154 226 XP_004339240.1 TBC domain containing protein [Acanthamoeba castellanii str. Neff] diamond 2352 94.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27997908 27997908 PRJNA674308_P_NODE_20245_length_219_cov_1.088235_g20010_i0 PRJNA674308 20245 219 1.088235 2.38323465 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 1.32e-8   NR XP_004334493.1 1257118 g20010 i0 37.9 0.904109589041096 66 41 90.4 0 10 207 82 147 XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] diamond 198 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27997933 27997933 PRJNA674308_P_NODE_46165_length_165_cov_0.896552_g45930_i0 PRJNA674308 46165 165 0.896552 1.4793108 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 5.38e-4   NR XP_004338339.1 1257118 g45930 i0 58.7 0.836363636363636 46 19 83.6 0 165 28 158 203 XP_004338339.1 bZIP transcription factor domain containing protein [Acanthamoeba castellanii str. Neff] diamond 138 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28388487 28388487 PRJNA674308_P_NODE_15886_length_243_cov_1.484536_g15651_i0 PRJNA674308 15886 243 1.484536 3.60742248 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 2.0399999999999998e-23   NR XP_004335708.1 1257118 g15651 i0 58.7 1.8641975308642 75 31 92.6 0 229 5 112 186 XP_004335708.1 endo1,3(4)-beta-glucanase [Acanthamoeba castellanii str. Neff] diamond 453 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28723993 28723993 PRJNA674308_P_NODE_24587_length_201_cov_1.703947_g24352_i0 PRJNA674308 24587 201 1.703947 3.42493347 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 90.1 3.2800000000000003e-21   NR 7SOG_A 5755 g24352 i0 62.1 1.95522388059702 66 25 98.5 0 3 200 33 98 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 393 90.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28850095 28850095 PRJNA674308_P_NODE_40188_length_167_cov_0.881356_g39953_i0 PRJNA674308 40188 167 0.881356 1.47186452 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 51.6 9.47e-6   NR XP_004338025.1 1257118 g39953 i0 51 1.81437125748503 51 24 89.8 1 156 7 23 73 XP_004338025.1 metal cation transporter, ZIP subfamily protein [Acanthamoeba castellanii str. Neff] diamond 303 51.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29229366 29229366 PRJNA674308_P_NODE_24469_length_202_cov_1.019608_g24234_i0 PRJNA674308 24469 202 1.019608 2.05960816 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 120 3.18e-32   NR XP_004356628.1 1257118 g24234 i0 89.4 0.98019801980198 66 7 98 0 200 3 1 66 XP_004356628.1 Mob4B protein isoform 3, putative [Acanthamoeba castellanii str. Neff] diamond 198 120 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29335809 29335809 PRJNA674308_P_NODE_48129_length_164_cov_0.904348_g47894_i0 PRJNA674308 48129 164 0.904348 1.48313072 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 76.6 8.45e-15   NR XP_004333417.1 1257118 g47894 i0 66.7 1.95731707317073 54 18 98.8 0 3 164 204 257 XP_004333417.1 26S proteasome nonATPase regulatory subunit 7, putative [Acanthamoeba castellanii str. Neff] diamond 321 76.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29923941 29923941 PRJNA674308_P_NODE_36091_length_169_cov_0.866667_g35856_i0 PRJNA674308 36091 169 0.866667 1.46466723 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.8 1.95e-5   NR XP_004339838.1 1257118 g35856 i0 58.5 0.727810650887574 41 17 72.8 0 47 169 1410 1450 XP_004339838.1 Beige/BEACH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 123 50.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30335006 30335006 PRJNA674308_P_NODE_52492_length_162_cov_0.920354_g52257_i0 PRJNA674308 52492 162 0.920354 1.49097348 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 49.3 6.14e-5   NR XP_004341646.1 1257118 g52257 i0 53.8 0.722222222222222 39 18 72.2 0 4 120 225 263 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 117 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30524098 30524098 PRJNA674308_P_NODE_24673_length_201_cov_1.368421_g24438_i0 PRJNA674308 24673 201 1.368421 2.75052621 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 98.2 2.33e-22   NR XP_004352082.1 1257118 g24438 i0 69.2 5.82089552238806 65 20 97 0 200 6 163 227 XP_004352082.1 Centractin, putative [Acanthamoeba castellanii str. Neff] diamond 1170 98.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31567398 31567398 PRJNA674308_P_NODE_44676_length_165_cov_1.706897_g44441_i0 PRJNA674308 44676 165 1.706897 2.81638005 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.1 2.19e-5   NR XP_004337104.1 1257118 g44441 i0 55.2 2 58 20 94.5 1 3 158 132 189 XP_004337104.1 Rasrelated GTPase [Acanthamoeba castellanii str. Neff] diamond 330 50.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32799710 32799710 PRJNA674308_P_NODE_22620_length_209_cov_1.293750_g22385_i0 PRJNA674308 22620 209 1.29375 2.7039375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99 1.91e-22   NR XP_004340296.1 1257118 g22385 i0 64.7 0.976076555023923 68 23 97.6 1 2 205 127 193 XP_004340296.1 uncharacterized protein ACA1_370300 [Acanthamoeba castellanii str. Neff] diamond 204 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;