RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA674308" and tax_phylum = "Candidatus Undinarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Undinarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674308 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27176413 27176413 PRJNA674308_P_NODE_33782_length_174_cov_1.664000_g33547_i0 PRJNA674308 33782 174 1.664 2.89536 Candidatus Undinarchaeales archaeon 3042728 Archaea Archaea 41.6 0.0383   NR MDP7282413.1 3042728 g33547 i0 42.9 1.08620689655172 63 26 94.8 3 3 167 1883 1943 MDP7282413.1 LamG domain-containing protein [Candidatus Undinarchaeales archaeon] diamond 189 41.6 1 Archaea   Nanobdellati Candidatus Undinarchaeota Candidatus Undinarchaeia Candidatus Undinarchaeales     Candidatus Undinarchaeales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;