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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA674308" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA674308 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5748449 5748449 PRJNA674308_P_NODE_7165_length_355_cov_1.359477_g6930_i0 PRJNA674308 7165 355 1.359477 4.82614335 Babesia bigemina 5866 SAR_Eukaryotes SAR_Eukaryotes 169 4.03e-47   NR XP_012767707.1 5866 g6930 i0 62.4 4.90140845070423 117 44 98.9 0 1 351 92 208 XP_012767707.1 thiodoxin reductase, putative [Babesia bigemina] diamond 1740 169 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
9573156 9573156 PRJNA674308_P_NODE_18648_length_226_cov_3.005650_g18413_i0 PRJNA674308 18648 226 3.00565 6.792769 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 102 3.919999999999999e-23   NR OEH75958.1 88456 g18413 i0 59.5 5.88053097345133 74 30 98.2 0 224 3 736 809 OEH75958.1 putative prolyl-tRNA synthetase [Cyclospora cayetanensis] diamond 1329 102 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
26650333 26650333 PRJNA674308_P_NODE_42241_length_166_cov_1.752137_g42006_i0 PRJNA674308 42241 166 1.752137 2.90854742 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.31e-16   NR GFE54016.1 5869 g42006 i0 71.2 11.3313253012048 52 15 94 0 164 9 318 369 GFE54016.1 polyadenylate binding protein [Babesia ovis] diamond 1881 82.8 0.995169082125604 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
27030396 27030396 PRJNA674308_P_NODE_9662_length_306_cov_1.750973_g9427_i0 PRJNA674308 9662 306 1.750973 5.35797738 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 60.5 4.75e-8   NR XP_034423527.1 5823 g9427 i0 32.6 5.1078431372549 92 59 90.2 1 1 276 438 526 XP_034423527.1 splicing factor 1, putative [Plasmodium berghei ANKA] diamond 1563 60.8 0.995065789473684 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
27694218 27694218 PRJNA674308_P_NODE_12064_length_276_cov_1.348018_g11829_i0 PRJNA674308 12064 276 1.348018 3.72052968 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 112 9.22e-29   NR XP_002370798.1 508771 g11829 i0 57.6 8 92 39 100 0 1 276 68 159 XP_002370798.1 small GTP binding protein rab1a, putative [Toxoplasma gondii ME49] diamond 2208 112 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27776906 27776906 PRJNA674308_P_NODE_28724_length_188_cov_1.496403_g28489_i0 PRJNA674308 28724 188 1.496403 2.81323764 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 50.4 3.2e-5   NR CEL64732.1 572307 g28489 i0 39.7 2.74468085106383 58 35 92.6 0 176 3 240 297 CEL64732.1 TPA: Ubiquitin, related [Neospora caninum Liverpool] diamond 516 50.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27934708 27934708 PRJNA674308_P_NODE_9725_length_305_cov_1.593750_g9490_i0 PRJNA674308 9725 305 1.59375 4.8609375 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 100 5.35e-24   NR XP_067803689.1 323732 g9490 i0 62.2 1.47540983606557 74 28 72.8 0 78 299 8 81 XP_067803689.1 bifunctional RNA recognition motif domain/RNA-binding domain superfamily/Nucleotide-binding alpha-beta plait domain superfamily [Babesia duncani] diamond 450 100 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
28881744 28881744 PRJNA674308_P_NODE_16088_length_242_cov_0.984456_g15853_i0 PRJNA674308 16088 242 0.984456 2.38238352 Porospora cf. gigantea A 2853593 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.36e-9   NR XP_067813127.1 2853593 g15853 i0 57.1 1.21487603305785 49 21 60.7 0 3 149 153 201 XP_067813127.1 MAG: uncharacterized protein KVP18_003657 [Porospora cf. gigantea A] diamond 294 63.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea A
30018771 30018771 PRJNA674308_P_NODE_36671_length_169_cov_0.866667_g36436_i0 PRJNA674308 36671 169 0.866667 1.46466723 Cryptosporidium canis 195482 SAR_Eukaryotes SAR_Eukaryotes 57 1.27e-7   NR KAJ1612632.1 195482 g36436 i0 56.5 1.63313609467456 46 20 81.7 0 144 7 106 151 KAJ1612632.1 cryptopain-cysteine proteinase secreted [Cryptosporidium canis] diamond 276 57 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium canis
30808513 30808513 PRJNA674308_P_NODE_50574_length_163_cov_0.912281_g50339_i0 PRJNA674308 50574 163 0.912281 1.48701803 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 80.1 6e-16   NR XP_011128544.1 110365 g50339 i0 62.3 0.975460122699387 53 20 97.5 0 3 161 161 213 XP_011128544.1 casein kinase I [Gregarina niphandrodes] diamond 159 80.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
31041888 31041888 PRJNA674308_P_NODE_17355_length_234_cov_0.870270_g17120_i0 PRJNA674308 17355 234 0.87027 2.0364318 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 50.8 4.7e-5   NR CAD2095709.1 5860 g17120 i0 38.6 9.62820512820513 83 44 97.4 1 230 3 91 173 CAD2095709.1 myosin-like protein, putative [Plasmodium vinckei] diamond 2253 50.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
31073232 31073232 PRJNA674308_P_NODE_16595_length_238_cov_1.650794_g16360_i0 PRJNA674308 16595 238 1.650794 3.92888972 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 101 6.69e-25   NR XP_028525792.1 5849 g16360 i0 66.7 6.35294117647059 72 24 90.8 0 217 2 1 72 XP_028525792.1 40S ribosomal protein S9, putative [Plasmodium gallinaceum] diamond 1512 102 0.990196078431373 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
31282411 31282411 PRJNA674308_P_NODE_4655_length_442_cov_2.562341_g4420_i0 PRJNA674308 4655 442 2.562341 11.32554722 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 73.9 4.27e-12   NR XP_013438480.1 51315 g4420 i0 35.8 0.739819004524887 109 70 74 0 6 332 1201 1309 XP_013438480.1 hypothetical protein ENH_00077430 [Eimeria necatrix] diamond 327 73.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
31883366 31883366 PRJNA674308_P_NODE_24617_length_201_cov_1.368421_g24382_i0 PRJNA674308 24617 201 1.368421 2.75052621 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 83.6 5.43e-17   NR XP_013233496.1 5802 g24382 i0 55.6 2.73134328358209 63 28 94 0 2 190 279 341 XP_013233496.1 AT4g18900/F13C5_70, related [Eimeria tenella] diamond 549 83.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
32421435 32421435 PRJNA674308_P_NODE_8119_length_334_cov_1.989474_g7884_i0 PRJNA674308 8119 334 1.989474 6.64484316 Hepatocystis sp. ex Piliocolobus tephrosceles 2600580 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0285   NR VWU48884.1 2600580 g7884 i0 32.9 0.62874251497006 70 38 62.9 2 23 232 247 307 VWU48884.1 RNA-binding protein musashi, putative [Hepatocystis sp. ex Piliocolobus tephrosceles] diamond 210 44.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Hepatocystis Hepatocystis sp. ex Piliocolobus tephrosceles

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;