RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA674308" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA674308 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12124170 12124170 PRJNA674308_P_NODE_46390_length_165_cov_0.896552_g46155_i0 PRJNA674308 46390 165 0.896552 1.4793108 Halobacteriales archaeon QH_6_64_2 1904752 Archaea Archaea 102 2.75e-24   NR PSP42842.1 1919154 g46155 i0 92.6 1.96363636363636 54 4 98.2 0 2 163 211 264 PSP42842.1 MAG: 1,4-dihydroxy-2-naphthoyl-CoA synthase [Halobacteriales archaeon QH_6_64_20] diamond 324 102 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon QH_6_64_20
27902864 27902864 PRJNA674308_P_NODE_52445_length_162_cov_0.920354_g52210_i0 PRJNA674308 52445 162 0.920354 1.49097348 Methanosarcinales archaeon 2250255 Archaea Archaea 44.7 9.84e-4   NR RYE84884.1 2250255 g52210 i0 54.5 0.611111111111111 33 15 61.1 0 101 3 70 102 RYE84884.1 MAG: hypothetical protein EOO65_01455 [Methanosarcinales archaeon] diamond 99 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
30524092 30524092 PRJNA674308_P_NODE_14373_length_254_cov_1.770732_g14138_i0 PRJNA674308 14373 254 1.770732 4.49765928 Methanosarcinales archaeon 2250255 Archaea Archaea 84 1.02e-16   NR RYE83132.1 2250255 g14138 i0 52.2 0.81496062992126 69 33 81.5 0 253 47 130 198 RYE83132.1 MAG: hypothetical protein EOO65_04430, partial [Methanosarcinales archaeon] diamond 207 84 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31673836 31673836 PRJNA674308_P_NODE_49997_length_163_cov_0.912281_g49762_i0 PRJNA674308 49997 163 0.912281 1.48701803 Halobacterium 2239 Archaea Archaea 76.3 5.67e-15   NR WP_157499861.1 2668074 g49762 i0 70.4 1.98773006134969 54 16 99.4 0 1 162 135 188 WP_157499861.1 DUF7260 family protein [Halobacterium sp. CBA1126] diamond 324 76.6 0.996083550913838 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. CBA1126

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;