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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA674050" and tax_kingdom = "Viridiplantae"

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tax_phylum 2

tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Viridiplantae · 31 ✖

bioproject 1

  • PRJNA674050 · 31 ✖

analysis 1

  • diamond · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19770446 19770446 PRJNA674050_P_NODE_20416_length_257_cov_1.603261_g20213_i0 PRJNA674050 20416 257 1.603261 4.12038077 Streptophyta 35493 Plants Plants 122 1.8e-34   NR XP_057861965.1 3369 g20213 i0 69.3 12.2568093385214 75 23 87.5 0 238 14 1 75 XP_057861965.1 small ribosomal subunit protein eS21y [Cryptomeria japonica] diamond 3150 122 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
21568447 21568447 PRJNA674050_P_NODE_31397_length_246_cov_1.791908_g31194_i0 PRJNA674050 31397 246 1.791908 4.40809368 Magnoliopsida 3398 Plants Plants 149 1.32e-39   NR KAJ4718469.1 155640 g31194 i0 80 22.4390243902439 80 16 97.6 0 2 241 1420 1499 KAJ4718469.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Melia azedarach] diamond 5520 149 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Meliaceae Melia Melia azedarach
26669948 26669948 PRJNA674050_P_NODE_39461_length_242_cov_0.917160_g39258_i0 PRJNA674050 39461 242 0.91716 2.2195272 Trebouxia sp. C 2796353 Plants Plants 51.2 3.85e-5   NR KAL0043787.1 2905655 g39258 i0 39 0.954545454545455 77 42 89.3 1 225 10 482 558 KAL0043787.1 hypothetical protein WJX82_010718 [Trebouxia sp. C0006] diamond 231 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
27144561 27144561 PRJNA674050_P_NODE_1682_length_514_cov_2.165533_g1483_i0 PRJNA674050 1682 514 2.165533 11.13083962 Rhynchospora pubera 906938 Plants Plants 72 4.32e-11   NR KAJ4740894.1 906938 g1483 i0 33.1 0.898832684824903 154 83 89.9 4 2 463 1247 1380 KAJ4740894.1 Transposon Ty1-H Gag-Pol polyprotein [Rhynchospora pubera] diamond 462 72 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Rhynchospora Rhynchospora pubera
27239713 27239713 PRJNA674050_P_NODE_31003_length_247_cov_0.885057_g30800_i0 PRJNA674050 31003 247 0.885057 2.18609079 Cucumis melo var. makuwa 1194695 Plants Plants 67 1.03e-10   NR KAA0031954.1 1194695 g30800 i0 44.7 0.923076923076923 76 39 92.3 1 246 19 183 255 KAA0031954.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa] diamond 228 67 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
27555483 27555483 PRJNA674050_P_NODE_14804_length_276_cov_2.295567_g14601_i0 PRJNA674050 14804 276 2.295567 6.33576492 Cardamine amara subsp. amara 228776 Plants Plants 63.9 2.04e-9   NR KAL1204473.1 228776 g14601 i0 42.5 1.73913043478261 80 43 85.9 2 40 276 1168 1245 KAL1204473.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cardamine amara subsp. amara] diamond 480 63.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Cardamine Cardamine amara
27725879 27725879 PRJNA674050_P_NODE_28424_length_248_cov_0.891429_g28221_i0 PRJNA674050 28424 248 0.891429 2.21074392 Magnoliopsida 3398 Plants Plants 81.3 1.06e-15   NR KAJ0974878.1 325984 g28221 i0 48.1 3.82258064516129 79 40 94.4 1 15 248 392 470 KAJ0974878.1 hypothetical protein J5N97_016843 [Dioscorea zingiberensis] diamond 948 82 0.991463414634146 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Dioscoreales Dioscoreaceae Dioscorea Dioscorea zingiberensis
28092439 28092439 PRJNA674050_P_NODE_39745_length_242_cov_0.917160_g39542_i0 PRJNA674050 39745 242 0.91716 2.2195272 Cucumis melo 3656 Plants Plants 115 6.12e-28   NR KAL0556725.1 3656 g39542 i0 69.2 1.93388429752066 78 24 96.7 0 3 236 38 115 KAL0556725.1 hypothetical protein IC582_005241 [Cucumis melo] diamond 468 115 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
28250200 28250200 PRJNA674050_P_NODE_28586_length_248_cov_0.891429_g28383_i0 PRJNA674050 28586 248 0.891429 2.21074392 Chlamydomonas incerta 51695 Plants Plants 120 2.15e-29   NR KAG2442811.1 51695 g28383 i0 67.1 3.82258064516129 79 26 95.6 0 12 248 340 418 KAG2442811.1 hypothetical protein HXX76_002890 [Chlamydomonas incerta] diamond 948 120 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
28281700 28281700 PRJNA674050_P_NODE_40146_length_242_cov_0.899408_g39943_i0 PRJNA674050 40146 242 0.899408 2.17656736 Daucus carota subsp. sativus 79200 Plants Plants 162 8.599999999999999e-49   NR WOH11578.1 79200 g39943 i0 97.5 0.991735537190083 80 2 99.2 0 1 240 52 131 WOH11578.1 hypothetical protein DCAR_0831068 [Daucus carota subsp. sativus] diamond 240 162 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Daucus Daucus carota
28376534 28376534 PRJNA674050_P_NODE_27946_length_249_cov_0.869318_g27743_i0 PRJNA674050 27946 249 0.869318 2.16460182 Tanacetum cinerariifolium 118510 Plants Plants 71.6 2.5e-12   NR GFA92273.1 118510 g27743 i0 45 2.79518072289157 80 44 96.4 0 2 241 71 150 GFA92273.1 coatomer subunit alpha-1-like [Tanacetum cinerariifolium] diamond 696 71.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
28408251 28408251 PRJNA674050_P_NODE_34026_length_245_cov_0.901163_g33823_i0 PRJNA674050 34026 245 0.901163 2.20784935 Capsicum annuum 4072 Plants Plants 103 2.07e-23   NR KAF3620100.1 4072 g33823 i0 78.7 0.746938775510204 61 13 74.7 0 188 6 263 323 KAF3620100.1 putative mediator of RNA polymerase II transcription subunit 25-like [Capsicum annuum] diamond 183 103 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
28945235 28945235 PRJNA674050_P_NODE_33528_length_245_cov_0.906977_g33325_i0 PRJNA674050 33528 245 0.906977 2.22209365 Vigna angularis 3914 Plants Plants 115 1.3600000000000002e-27   NR XP_017428581.2 3914 g33325 i0 70.4 0.991836734693878 81 24 99.2 0 243 1 9 89 XP_017428581.2 uncharacterized protein LOC108336620 [Vigna angularis] diamond 243 115 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna angularis
29272395 29272395 PRJNA674050_P_NODE_31969_length_246_cov_0.901734_g31766_i0 PRJNA674050 31969 246 0.901734 2.21826564 Magnoliopsida 3398 Plants Plants 80.1 1.98e-15   NR KAI3691666.1 4217 g31766 i0 48.6 9.5 70 36 85.4 0 36 245 287 356 KAI3691666.1 hypothetical protein L6452_31467 [Arctium lappa] diamond 2337 80.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Arctium Arctium lappa
29367427 29367427 PRJNA674050_P_NODE_17949_length_265_cov_1.588542_g17746_i0 PRJNA674050 17949 265 1.588542 4.2096363 Eukaryota 2759 Plants Plants 88.6 1.08e-18   NR XP_027068940.1 13443 g17746 i0 47.8 14.0377358490566 90 34 95.1 3 8 259 155 237 XP_027068940.1 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2 [Coffea arabica] diamond 3720 88.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Gentianales Rubiaceae Coffea Coffea arabica
29619519 29619519 PRJNA674050_P_NODE_12170_length_288_cov_0.888372_g11967_i0 PRJNA674050 12170 288 0.888372 2.55851136 Cucumis 3655 Plants Plants 62 1.1e-8   NR KAL4023606.1 3656 g11967 i0 50.8 1.90625 61 26 59.4 1 279 109 222 282 KAL4023606.1 hypothetical protein IC575_017365 [Cucumis melo] diamond 549 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
29828985 29828985 PRJNA674050_P_NODE_22371_length_253_cov_0.866667_g22168_i0 PRJNA674050 22371 253 0.866667 2.19266751 Heracleum sosnowskyi 360622 Plants Plants 44.7 0.00863   NR KAK1371806.1 360622 g22168 i0 55.6 0.426877470355731 36 16 42.7 0 114 7 319 354 KAK1371806.1 F-box domain-containing protein [Heracleum sosnowskyi] diamond 108 44.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
30050014 30050014 PRJNA674050_P_NODE_9851_length_301_cov_6.982456_g9648_i0 PRJNA674050 9851 301 6.982456 21.01719256 Closterium sp. Naga37s-1 2996811 Plants Plants 47 0.0023   NR CAI5525984.1 2996811 g9648 i0 45.3 0.747508305647841 75 29 65.8 5 61 258 152 223 CAI5525984.1 unnamed protein product [Closterium sp. Naga37s-1] diamond 225 47 1 Eukaryota   Viridiplantae Streptophyta Zygnematophyceae Desmidiales Closteriaceae Closterium Closterium sp. Naga37s-1
30081617 30081617 PRJNA674050_P_NODE_31252_length_247_cov_0.873563_g31049_i0 PRJNA674050 31252 247 0.873563 2.15770061 Haematococcus lacustris 44745 Plants Plants 90.1 8.52e-19   NR KAJ9513997.1 44745 g31049 i0 48.9 1.09311740890688 90 38 99.6 1 246 1 541 630 KAJ9513997.1 hypothetical protein QJQ45_021078 [Haematococcus lacustris] diamond 270 90.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
30239762 30239762 PRJNA674050_P_NODE_23252_length_252_cov_0.865922_g23049_i0 PRJNA674050 23252 252 0.865922 2.18212344 Cucumis melo 3656 Plants Plants 118 1.7e-29   NR KAL0541610.1 3656 g23049 i0 64.2 2.89285714285714 81 29 96.4 0 3 245 68 148 KAL0541610.1 hypothetical protein IC582_021663 [Cucumis melo] diamond 729 118 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
30346970 30346970 PRJNA674050_P_NODE_15892_length_272_cov_1.924623_g15689_i0 PRJNA674050 15892 272 1.924623 5.23497456 Chlorellales 35460 Plants Plants 84.3 1.17e-18   NR PRW20803.1 3076 g15689 i0 58.9 6.9375 90 26 99.3 2 270 1 27 105 PRW20803.1 60S ribosomal L35-like [Chlorella sorokiniana] diamond 1887 85.1 0.990599294947121 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30461353 30461353 PRJNA674050_P_NODE_27113_length_249_cov_0.886364_g26910_i0 PRJNA674050 27113 249 0.886364 2.20704636 Capsicum baccatum 33114 Plants Plants 67.4 1.78e-11   NR PHT29497.1 33114 g26910 i0 71.8 0.469879518072289 39 11 47 0 118 234 21 59 PHT29497.1 hypothetical protein CQW23_30907 [Capsicum baccatum] diamond 117 67.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum baccatum
30693977 30693977 PRJNA674050_P_NODE_35933_length_244_cov_0.906433_g35730_i0 PRJNA674050 35933 244 0.906433 2.21169652 Magnoliopsida 3398 Plants Plants 43.9 0.00625   NR XP_050883694.1 3888 g35730 i0 78.6 1.0327868852459 28 6 34.4 0 4 87 113 140 XP_050883694.1 uncharacterized protein At4g28440-like [Pisum sativum] diamond 252 44.3 0.99097065462754 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lathyrus Lathyrus oleraceus
30840049 30840049 PRJNA674050_P_NODE_32074_length_246_cov_0.901734_g31871_i0 PRJNA674050 32074 246 0.901734 2.21826564 Triticum aestivum 4565 Plants Plants 110 1.8000000000000002e-28   NR KAF6988046.1 4565 g31871 i0 74 0.890243902439024 73 19 89 0 26 244 1 73 KAF6988046.1 hypothetical protein CFC21_005632 [Triticum aestivum] diamond 219 110 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
31282377 31282377 PRJNA674050_P_NODE_13235_length_283_cov_1.204762_g13032_i0 PRJNA674050 13235 283 1.2047620000000001 3.40947646 Brassica napus 3708 Plants Plants 107 8.43e-25   NR WZZ84266.1 3708 g13032 i0 63.3 3.81625441696113 90 31 95.4 1 1 270 890 977 WZZ84266.1 hypothetical protein YC2023_112845 [Brassica napus] diamond 1080 107 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
31314076 31314076 PRJNA674050_P_NODE_22955_length_252_cov_0.871508_g22752_i0 PRJNA674050 22955 252 0.871508 2.19620016 Aegilops tauschii subsp. strangulata 200361 Plants Plants 60.1 1.9e-8   NR XP_040251945.1 200361 g22752 i0 59.6 0.55952380952381 47 19 56 0 92 232 1 47 XP_040251945.1 translation initiation factor IF-2-like [Aegilops tauschii subsp. strangulata] diamond 141 60.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Aegilops Aegilops tauschii
31756891 31756891 PRJNA674050_P_NODE_30997_length_247_cov_0.885057_g30794_i0 PRJNA674050 30997 247 0.885057 2.18609079 Capsicum annuum 4072 Plants Plants 49.7 2.35e-5   NR XP_016558034.1 4072 g30794 i0 52.2 0.558704453441296 46 22 55.9 0 138 1 59 104 XP_016558034.1 uncharacterized protein LOC107857699 [Capsicum annuum] diamond 138 49.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
31820052 31820052 PRJNA674050_P_NODE_26357_length_250_cov_0.870056_g26154_i0 PRJNA674050 26357 250 0.870056 2.17514 Capsicum baccatum 33114 Plants Plants 46.6 0.00163   NR PHT29684.1 33114 g26154 i0 57.9 0.456 38 16 45.6 0 24 137 285 322 PHT29684.1 putative L-gulonolactone oxidase 4 [Capsicum baccatum] diamond 114 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum baccatum
32041682 32041682 PRJNA674050_P_NODE_31938_length_246_cov_0.901734_g31735_i0 PRJNA674050 31938 246 0.901734 2.21826564 Escallonia herrerae 1293975 Plants Plants 63.5 1.73e-9   NR KAK3035551.1 1293975 g31735 i0 48.3 2.17073170731707 60 31 73.2 0 241 62 231 290 KAK3035551.1 hypothetical protein RJ639_034756 [Escallonia herrerae] diamond 534 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Escalloniales Escalloniaceae Escallonia Escallonia herrerae
32516500 32516500 PRJNA674050_P_NODE_35399_length_244_cov_0.912281_g35196_i0 PRJNA674050 35399 244 0.912281 2.22596564 Tetradesmus obliquus 3088 Plants Plants 61.6 8.02e-9   NR WIA09331.1 3088 g35196 i0 55.6 3.90983606557377 45 20 55.3 0 233 99 500 544 WIA09331.1 hypothetical protein OEZ85_008738 [Tetradesmus obliquus] diamond 954 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
32894189 32894189 PRJNA674050_P_NODE_30800_length_247_cov_0.890805_g30597_i0 PRJNA674050 30800 247 0.890805 2.20028835 Triticum aestivum 4565 Plants Plants 77 3.17e-14   NR XBH59356.1 4565 g30597 i0 74.1 0.65587044534413 54 14 65.6 0 164 3 92 145 XBH59356.1 hypothetical protein VPH35_080639 [Triticum aestivum] diamond 162 77 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;