RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA674050" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA674050 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28060820 28060820 PRJNA674050_P_NODE_27325_length_249_cov_0.880682_g27122_i0 PRJNA674050 27325 249 0.880682 2.19289818 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 61.2 1.19e-8   NR TFH23051.1 2026714 g27122 i0 40 2.07228915662651 85 48 98.8 2 248 3 412 496 TFH23051.1 MAG: hypothetical protein E4G67_03610 [Candidatus Bathyarchaeota archaeon] diamond 516 61.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28281697 28281697 PRJNA674050_P_NODE_18926_length_262_cov_1.359788_g18723_i0 PRJNA674050 18926 262 1.359788 3.56264456 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 167 3.77e-50   NR HEY7778332.1 2169593 g18723 i0 81.6 0.99618320610687 87 16 99.6 0 1 261 144 230 HEY7778332.1 YkgJ family cysteine cluster protein [Nitrososphaeraceae archaeon] diamond 261 167 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30366532 30366532 PRJNA674050_P_NODE_39492_length_242_cov_0.917160_g39289_i0 PRJNA674050 39492 242 0.91716 2.2195272 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 76.3 4.33e-15   NR HJU79998.1 2169593 g39289 i0 79.2 0.59504132231405 48 10 59.5 0 98 241 1 48 HJU79998.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 144 76.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;