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contig_metadata

35 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 35 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 35 ✖

analysis 1

  • diamond · 35 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4471010 4471010 PRJNA674048_P_NODE_18004_length_209_cov_1.300000_g17801_i0 PRJNA674048 18004 209 1.3 2.717 Eukaryota 2759 Plants Plants 119 7.299999999999998e-32   NR O65082.1 3335 g17801 i0 78.3 71.311004784689 69 15 99 0 207 1 3 71 O65082.1 RecName: Full=Large ribosomal subunit protein eL15y; AltName: Full=60S ribosomal protein L15-2 [Picea mariana] diamond 14904 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea mariana
5746672 5746672 PRJNA674048_P_NODE_6525_length_394_cov_1.289855_g6322_i0 PRJNA674048 6525 394 1.289855 5.0820287 Eukaryota 2759 Plants Plants 221 2.13e-70   NR KHN00487.1 3848 g6322 i0 82.9 113.017766497462 123 21 93.7 0 2 370 100 222 KHN00487.1 60S ribosomal protein L8-3 [Glycine soja] diamond 44529 221 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine soja
5746676 5746676 PRJNA674048_P_NODE_9525_length_307_cov_1.166667_g9322_i0 PRJNA674048 9525 307 1.166667 3.58166769 Riccia fluitans 41844 Plants Plants 164 7.7e-45   NR KAL2623209.1 41844 g9322 i0 80.2 1.97394136807818 101 20 98.7 0 306 4 447 547 KAL2623209.1 hypothetical protein R1flu_003414 [Riccia fluitans] diamond 606 164 1 Eukaryota Embryophyta Viridiplantae Streptophyta Marchantiopsida Marchantiales Ricciaceae Riccia Riccia fluitans
9571723 9571723 PRJNA674048_P_NODE_8368_length_334_cov_1.824561_g8165_i0 PRJNA674048 8368 334 1.824561 6.09403374 Magnoliopsida 3398 Plants Plants 164 2.01e-48   NR KAE8816922.1 4513 g8165 i0 74.3 131.991017964072 105 27 94.3 0 333 19 109 213 KAE8816922.1 hypothetical protein D1007_05474 [Hordeum vulgare] diamond 44085 164 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
22843305 22843305 PRJNA674048_P_NODE_12538_length_258_cov_1.272727_g12335_i0 PRJNA674048 12538 258 1.272727 3.28363566 Prunus dulcis 3755 Plants Plants 115 1.92e-29   NR BBG98420.1 3755 g12335 i0 67.1 6.03488372093023 85 28 98.8 0 256 2 83 167 BBG98420.1 ubiquitin extension protein 1, partial [Prunus dulcis] diamond 1557 115 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Prunus Prunus dulcis
23595918 23595918 PRJNA674048_P_NODE_19499_length_200_cov_1.377483_g19296_i0 PRJNA674048 19499 200 1.377483 2.754966 Magnoliopsida 3398 Plants Plants 101 5.219999999999999e-23   NR WOK95121.1 4628 g19296 i0 72.7 15.84 66 18 99 0 200 3 430 495 WOK95121.1 multidrug resistance protein [Canna indica] diamond 3168 102 0.990196078431373 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Cannaceae Canna Canna indica
26669940 26669940 PRJNA674048_P_NODE_24561_length_177_cov_2.023438_g24358_i0 PRJNA674048 24561 177 2.023438 3.58148526 Thalictrum thalictroides 46969 Plants Plants 82.8 5.42e-17   NR KAF5198043.1 46969 g24358 i0 63.8 1.96610169491525 58 21 98.3 0 176 3 262 319 KAF5198043.1 Pol polyprotein [Thalictrum thalictroides] diamond 348 82.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Ranunculaceae Thalictrum Thalictrum thalictroides
27271400 27271400 PRJNA674048_P_NODE_12783_length_255_cov_1.514563_g12580_i0 PRJNA674048 12783 255 1.514563 3.86213565 Rhynchospora tenuis 198213 Plants Plants 97.4 1.06e-22   NR KAJ3686211.1 198213 g12580 i0 59 2.09411764705882 83 31 94.1 1 254 15 150 232 KAJ3686211.1 hypothetical protein LUZ61_015375 [Rhynchospora tenuis] diamond 534 97.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Rhynchospora Rhynchospora tenuis
27366513 27366513 PRJNA674048_P_NODE_32803_length_162_cov_0.920354_g32600_i0 PRJNA674048 32803 162 0.920354 1.49097348 Nicotiana sylvestris 4096 Plants Plants 106 3.75e-27   NR XP_070005746.1 4096 g32600 i0 94.4 2 54 3 100 0 162 1 95 148 XP_070005746.1 uncharacterized protein [Nicotiana sylvestris] diamond 324 106 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
27745395 27745395 PRJNA674048_P_NODE_26424_length_170_cov_2.561983_g26221_i0 PRJNA674048 26424 170 2.561983 4.3553711 Cucurbita argyrosperma subsp. sororia 37648 Plants Plants 95.5 3.23e-22   NR KAG6585161.1 37648 g26221 i0 84.7 5.04705882352941 59 6 98.8 1 1 168 81 139 KAG6585161.1 ADP-ribosylation factor 2, partial [Cucurbita argyrosperma subsp. sororia] diamond 858 95.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucurbita Cucurbita argyrosperma
28356863 28356863 PRJNA674048_P_NODE_30786_length_164_cov_0.904348_g30583_i0 PRJNA674048 30786 164 0.904348 1.48313072 Streptophyta 35493 Plants Plants 47.8 3.61e-5   NR KAJ7547078.1 34168 g30583 i0 51.2 4.1890243902439 43 21 78.7 0 135 7 38 80 KAJ7547078.1 hypothetical protein O6H91_08G067900 [Diphasiastrum complanatum] diamond 687 48.1 0.993762993762994 Eukaryota Embryophyta Viridiplantae Streptophyta Lycopodiopsida Lycopodiales Lycopodiaceae Diphasiastrum Diphasiastrum complanatum
28376525 28376525 PRJNA674048_P_NODE_18506_length_206_cov_1.070064_g18303_i0 PRJNA674048 18506 206 1.070064 2.20433184 Cicer arietinum 3827 Plants Plants 42.4 0.0311   NR XP_004513007.1 3827 g18303 i0 38.1 0.91747572815534 63 33 88.8 3 191 9 264 322 XP_004513007.1 cyclin-dependent kinase F-1 [Cicer arietinum] diamond 189 42.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Cicer Cicer arietinum
28483314 28483314 PRJNA674048_P_NODE_22326_length_186_cov_1.518248_g22123_i0 PRJNA674048 22326 186 1.518248 2.82394128 Magnoliopsida 3398 Plants Plants 52 5.24e-6   NR KAL0532473.1 3656 g22123 i0 54.3 2.25806451612903 46 21 74.2 0 139 2 126 171 KAL0532473.1 hypothetical protein IC582_031415 [Cucumis melo] diamond 420 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
28913121 28913121 PRJNA674048_P_NODE_15228_length_229_cov_2.333333_g15025_i0 PRJNA674048 15228 229 2.333333 5.34333257 Chenopodium quinoa 63459 Plants Plants 62 8.64e-10   NR XP_021735902.1 63459 g15025 i0 52.6 4.87336244541485 76 34 99.6 1 228 1 53 126 XP_021735902.1 60S ribosomal protein L24-like [Chenopodium quinoa] diamond 1116 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Chenopodium Chenopodium quinoa
29986986 29986986 PRJNA674048_P_NODE_12691_length_256_cov_1.507246_g12488_i0 PRJNA674048 12691 256 1.507246 3.85854976 Lotus japonicus 34305 Plants Plants 102 2.06e-25   NR AFK43985.1 34305 g12488 i0 59.5 0.8671875 74 30 86.7 0 256 35 102 175 AFK43985.1 unknown [Lotus japonicus] diamond 222 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
29999034 29999034 PRJNA674048_P_NODE_32791_length_162_cov_0.920354_g32588_i0 PRJNA674048 32791 162 0.920354 1.49097348 Triticum 4564 Plants Plants 67 3.32e-11   NR XBH98230.1 4565 g32588 i0 59.6 11.6111111111111 52 21 96.3 0 3 158 123 174 XBH98230.1 hypothetical protein VPH35_127773 [Triticum aestivum] diamond 1881 67 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
30061933 30061933 PRJNA674048_P_NODE_27991_length_168_cov_0.873950_g27788_i0 PRJNA674048 27991 168 0.87395 1.468236 Viridiplantae 33090 Plants Plants 82.4 1.38e-16   NR GBG73751.1 69332 g27788 i0 70.9 2.94642857142857 55 16 98.2 0 2 166 417 471 GBG73751.1 hypothetical protein CBR_g17091 [Chara braunii] diamond 495 82.4 1 Eukaryota   Viridiplantae Streptophyta Charophyceae Charales Characeae Chara Chara braunii
30303400 30303400 PRJNA674048_P_NODE_27772_length_168_cov_0.873950_g27569_i0 PRJNA674048 27772 168 0.87395 1.468236 Vanilla planifolia 51239 Plants Plants 44.3 7.26e-4   NR KAG0449908.1 51239 g27569 i0 50 0.75 42 21 75 0 164 39 7 48 KAG0449908.1 hypothetical protein HPP92_027156 [Vanilla planifolia] diamond 126 44.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Vanilla Vanilla planifolia
30346969 30346969 PRJNA674048_P_NODE_23052_length_183_cov_1.552239_g22849_i0 PRJNA674048 23052 183 1.552239 2.84059737 Eukaryota 2759 Plants Plants 79.7 1.51e-16   NR GLJ10282.1 3369 g22849 i0 74.1 11.5737704918033 58 15 95.1 0 175 2 32 89 GLJ10282.1 hypothetical protein SUGI_0125390 [Cryptomeria japonica] diamond 2118 80.1 0.995006242197254 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
30398206 30398206 PRJNA674048_P_NODE_16313_length_220_cov_2.923977_g16110_i0 PRJNA674048 16313 220 2.923977 6.4327494 Lotus japonicus 34305 Plants Plants 84.7 1.59e-17   NR AFK37198.1 34305 g16110 i0 60.3 0.995454545454545 73 27 99.5 1 220 2 14 84 AFK37198.1 unknown [Lotus japonicus] diamond 219 84.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
30441380 30441380 PRJNA674048_P_NODE_30133_length_165_cov_0.896552_g29930_i0 PRJNA674048 30133 165 0.896552 1.4793108 Brassicales 3699 Plants Plants 43.5 0.00693   NR XP_010532647.1 28532 g29930 i0 54.1 3.23636363636364 37 16 67.3 1 164 54 319 354 XP_010532647.1 PREDICTED: uncharacterized protein LOC104808625 [Tarenaya hassleriana] diamond 534 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Cleomaceae Tarenaya Tarenaya hassleriana
30472954 30472954 PRJNA674048_P_NODE_32133_length_163_cov_0.912281_g31930_i0 PRJNA674048 32133 163 0.912281 1.48701803 Eukaryota 2759 Plants Plants 48.5 1.15e-4   NR XP_057847574.2 3369 g31930 i0 47.2 1.95092024539877 53 28 97.5 0 2 160 49 101 XP_057847574.2 ervatamin-B [Cryptomeria japonica] diamond 318 48.9 0.991820040899796 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
30650258 30650258 PRJNA674048_P_NODE_30733_length_164_cov_1.356522_g30530_i0 PRJNA674048 30733 164 1.356522 2.22469608 Tanacetum cinerariifolium 118510 Plants Plants 43.5 0.00691   NR GEX36784.1 118510 g30530 i0 46.3 8.26829268292683 54 29 98.8 0 164 3 712 765 GEX36784.1 hypothetical protein [Tanacetum cinerariifolium] diamond 1356 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
31250807 31250807 PRJNA674048_P_NODE_28635_length_167_cov_0.881356_g28432_i0 PRJNA674048 28635 167 0.881356 1.47186452 Centaurea solstitialis 347529 Plants Plants 66.2 3.49e-11   NR KAJ9568075.1 347529 g28432 i0 82.5 1.43712574850299 40 7 71.9 0 3 122 215 254 KAJ9568075.1 hypothetical protein OSB04_004041 [Centaurea solstitialis] diamond 240 66.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Centaurea Centaurea solstitialis
31567356 31567356 PRJNA674048_P_NODE_28756_length_167_cov_0.881356_g28553_i0 PRJNA674048 28756 167 0.881356 1.47186452 Sphagnum balticum 128184 Plants Plants 98.2 1.17e-24   NR CAM6001409.1 128184 g28553 i0 83.3 0.970059880239521 54 9 97 0 166 5 11 64 CAM6001409.1 unnamed protein product [Sphagnum balticum] diamond 162 98.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
31661836 31661836 PRJNA674048_P_NODE_26777_length_169_cov_1.733333_g26574_i0 PRJNA674048 26777 169 1.733333 2.92933277 Nicotiana sylvestris 4096 Plants Plants 94.7 6.2e-21   NR XP_070022261.1 4096 g26574 i0 93 1.50887573964497 43 3 76.3 0 3 131 5 47 XP_070022261.1 uncharacterized protein [Nicotiana sylvestris] diamond 255 94.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
31673825 31673825 PRJNA674048_P_NODE_18797_length_204_cov_1.341935_g18594_i0 PRJNA674048 18797 204 1.341935 2.7375474 Magnoliopsida 3398 Plants Plants 68.6 1.83e-11   NR CAM5851713.1 13385 g18594 i0 51.5 7.95588235294118 68 30 100 2 204 1 170 234 CAM5851713.1 unnamed protein product [Calluna vulgaris] diamond 1623 68.9 0.995645863570392 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Calluna Calluna vulgaris
31737048 31737048 PRJNA674048_P_NODE_12957_length_253_cov_1.019608_g12754_i0 PRJNA674048 12957 253 1.019608 2.57960824 Streptophyta 35493 Plants Plants 94.7 2.15e-20   NR GAQ85347.1 105231 g12754 i0 54.9 15.1541501976285 82 37 97.2 0 8 253 515 596 GAQ85347.1 Ca2+-binding actin-bundling protein [Klebsormidium nitens] diamond 3834 94.7 1 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium nitens
31788317 31788317 PRJNA674048_P_NODE_31957_length_163_cov_0.912281_g31754_i0 PRJNA674048 31957 163 0.912281 1.48701803 Heliosperma pusillum 39905 Plants Plants 47.4 4.32e-5   NR KAH9621775.1 39905 g31754 i0 67.6 3.11042944785276 34 11 62.6 0 163 62 47 80 KAH9621775.1 hypothetical protein KSS87_016556 [Heliosperma pusillum] diamond 507 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Heliosperma Heliosperma pusillum
31831885 31831885 PRJNA674048_P_NODE_10877_length_283_cov_1.760684_g10674_i0 PRJNA674048 10877 283 1.760684 4.98273572 Eukaryota 2759 Plants Plants 147 1.3399999999999996e-42   NR KAI5400097.1 3888 g10674 i0 67.7 17.7455830388693 93 30 98.6 0 279 1 52 144 KAI5400097.1 ribosomal 40S subunit protein S18A [Pisum sativum] diamond 5022 148 0.993243243243243 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lathyrus Lathyrus oleraceus
31851662 31851662 PRJNA674048_P_NODE_23117_length_183_cov_1.462687_g22914_i0 PRJNA674048 23117 183 1.462687 2.67671721 Oryza meyeriana var. granulata 110450 Plants Plants 74.7 7.44e-14   NR KAF0908520.1 110450 g22914 i0 55.2 2.85245901639344 58 26 95.1 0 8 181 234 291 KAF0908520.1 hypothetical protein E2562_025880 [Oryza meyeriana var. granulata] diamond 522 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza meyeriana
32401755 32401755 PRJNA674048_P_NODE_8819_length_323_cov_1.846715_g8616_i0 PRJNA674048 8819 323 1.846715 5.96488945 Eukaryota 2759 Plants Plants 110 3.8500000000000006e-27   NR NP_001361303.1 4577 g8616 i0 70.1 7.01238390092879 77 23 71.5 0 2 232 191 267 NP_001361303.1 40S ribosomal protein S2-like [Zea mays] diamond 2265 111 0.990990990990991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
32528391 32528391 PRJNA674048_P_NODE_31679_length_163_cov_0.912281_g31476_i0 PRJNA674048 31679 163 0.912281 1.48701803 Poaceae 4479 Plants Plants 62.4 1.42e-9   NR AQK53328.1 4577 g31476 i0 62.5 8.98159509202454 48 18 88.3 0 146 3 650 697 AQK53328.1 Putative cytochrome P450 superfamily protein [Zea mays] diamond 1464 62.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
32843125 32843125 PRJNA674048_P_NODE_27780_length_168_cov_0.873950_g27577_i0 PRJNA674048 27780 168 0.87395 1.468236 root 1 Root_unresolved Root_unresolved 49.3 6.48e-5   NR GLJ11224.1 3369 g27577 i0 37 23.2321428571429 54 34 96.4 0 2 163 422 475 GLJ11224.1 hypothetical protein SUGI_0147690 [Cryptomeria japonica] diamond 3903 49.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
32874705 32874705 PRJNA674048_P_NODE_32780_length_162_cov_0.920354_g32577_i0 PRJNA674048 32780 162 0.920354 1.49097348 Eukaryota 2759 Plants Plants 97.4 9.09e-24   NR XP_021887561.1 3649 g32577 i0 81.1 31.4074074074074 53 10 98.1 0 160 2 17 69 XP_021887561.1 probable alpha-mannosidase At5g13980, partial [Carica papaya] diamond 5088 97.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Caricaceae Carica Carica papaya

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;