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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13397150 13397150 PRJNA674048_P_NODE_14491_length_236_cov_1.668449_g14288_i0 PRJNA674048 14491 236 1.668449 3.93753964 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 108 5.5e-26   NR TMW60420.1 41045 g14288 i0 69.6 3 79 23 99.2 1 236 3 120 198 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 708 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
15194448 15194448 PRJNA674048_P_NODE_14432_length_236_cov_4.213904_g14229_i0 PRJNA674048 14432 236 4.213904 9.94481344 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 119 3.21e-32   NR KAF0743747.1 100861 g14229 i0 70.5 21.7881355932203 78 23 99.2 0 236 3 1 78 KAF0743747.1 hypothetical protein Ae201684_001401 [Aphanomyces euteiches] diamond 5142 119 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
26669941 26669941 PRJNA674048_P_NODE_28821_length_167_cov_0.881356_g28618_i0 PRJNA674048 28821 167 0.881356 1.47186452 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 94 1.2e-20   NR OQR98052.1 1202772 g28618 i0 74.1 2.94610778443114 54 14 97 0 4 165 138 191 OQR98052.1 alanyl-tRNA synthetase, mitochondrial precursor [Achlya hypogyna] diamond 492 94 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
27555479 27555479 PRJNA674048_P_NODE_25984_length_172_cov_1.650407_g25781_i0 PRJNA674048 25984 172 1.650407 2.83870004 Phytophthora fragariaefolia 1490495 SAR_Eukaryotes SAR_Eukaryotes 68.2 1.74e-12   NR GMF45174.1 1490495 g25781 i0 82.5 3.62790697674419 40 7 69.8 0 171 52 123 162 GMF45174.1 unnamed protein product [Phytophthora fragariaefolia] diamond 624 68.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariaefolia
28029421 28029421 PRJNA674048_P_NODE_14125_length_240_cov_0.984293_g13922_i0 PRJNA674048 14125 240 0.984293 2.3623032 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 57 3.36e-7   NR KAF0697660.1 120398 g13922 i0 45.3 3.1875 64 34 80 1 1 192 122 184 KAF0697660.1 hypothetical protein As57867_011637 [Aphanomyces stellatus] diamond 765 57 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
28281694 28281694 PRJNA674048_P_NODE_27666_length_168_cov_1.016807_g27463_i0 PRJNA674048 27666 168 1.016807 1.70823576 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 82.4 9.32e-17   NR CCA25446.1 890382 g27463 i0 74.5 3.92857142857143 55 14 98.2 0 167 3 317 371 CCA25446.1 palmitoyltransferase putative [Albugo laibachii Nc14] diamond 660 82.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
28451851 28451851 PRJNA674048_P_NODE_19586_length_199_cov_3.393333_g19383_i0 PRJNA674048 19586 199 3.393333 6.75273267 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 87.4 3.85e-18   NR TMW60811.1 41045 g19383 i0 59.4 4.82412060301507 64 26 96.5 0 2 193 491 554 TMW60811.1 hypothetical protein Poli38472_000853 [Pythium oligandrum] diamond 960 87.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
28514887 28514887 PRJNA674048_P_NODE_10807_length_284_cov_1.991489_g10604_i0 PRJNA674048 10807 284 1.991489 5.65582876 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 114 4.21e-30   NR KAJ8524041.1 4785 g10604 i0 59.4 4.03521126760563 96 36 99.3 2 282 1 24 118 KAJ8524041.1 hypothetical protein ON010_g17076 [Phytophthora cinnamomi] diamond 1146 115 0.991304347826087 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
29493648 29493648 PRJNA674048_P_NODE_30790_length_164_cov_0.904348_g30587_i0 PRJNA674048 30790 164 0.904348 1.48313072 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 57 1.18e-7   NR KAG9408090.1 112091 g30587 i0 52.5 3.09146341463415 40 19 73.2 0 1 120 559 598 KAG9408090.1 hypothetical protein AC1031_021324 [Aphanomyces cochlioides] diamond 507 57 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
30156607 30156607 PRJNA674048_P_NODE_27332_length_169_cov_0.866667_g27129_i0 PRJNA674048 27332 169 0.866667 1.46466723 root 1 Root_unresolved Root_unresolved 62.8 1.18e-9   NR XP_067814863.1 4779 g27129 i0 49.1 12.0532544378698 57 28 99.4 1 2 169 712 768 XP_067814863.1 hypothetical protein CCR75_002995 [Bremia lactucae] diamond 2037 63.2 0.993670886075949 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
30239759 30239759 PRJNA674048_P_NODE_30392_length_165_cov_0.896552_g30189_i0 PRJNA674048 30392 165 0.896552 1.4793108 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 62 1.26e-9   NR TYZ62043.1 1485010 g30189 i0 54.7 0.963636363636364 53 24 96.4 0 7 165 189 241 TYZ62043.1 hypothetical protein PybrP1_004634, partial [[Pythium] brassicae (nom. inval.)] diamond 159 62 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
31357763 31357763 PRJNA674048_P_NODE_31596_length_163_cov_0.912281_g31393_i0 PRJNA674048 31596 163 0.912281 1.48701803 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 58.2 4.41e-8   NR KAH9141002.1 100861 g31393 i0 51.9 9.57055214723926 52 25 95.7 0 158 3 245 296 KAH9141002.1 hypothetical protein AeRB84_014796 [Aphanomyces euteiches] diamond 1560 58.2 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
31420906 31420906 PRJNA674048_P_NODE_20616_length_194_cov_1.400000_g20413_i0 PRJNA674048 20616 194 1.4 2.716 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 53.5 3.03e-6   NR TMW67882.1 41045 g20413 i0 41.7 11.9536082474227 60 34 92.8 1 192 13 60 118 TMW67882.1 hypothetical protein Poli38472_007554 [Pythium oligandrum] diamond 2319 53.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31535726 31535726 PRJNA674048_P_NODE_27216_length_169_cov_0.866667_g27013_i0 PRJNA674048 27216 169 0.866667 1.46466723 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 57.4 1.92e-8   NR KAL0582063.1 65357 g27013 i0 50 0.994082840236686 56 28 99.4 0 2 169 89 144 KAL0582063.1 hypothetical protein ABG067_008326, partial [Albugo candida] diamond 168 57.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31851661 31851661 PRJNA674048_P_NODE_17457_length_212_cov_2.460123_g17254_i0 PRJNA674048 17457 212 2.460123 5.21546076 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 76.6 2.79e-14   NR OQR90306.1 1202772 g17254 i0 78.4 0.721698113207547 51 10 72.2 1 3 155 569 618 OQR90306.1 polyadenylate-binding protein 1-B [Achlya hypogyna] diamond 153 76.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
31926978 31926978 PRJNA674048_P_NODE_21197_length_191_cov_1.464789_g20994_i0 PRJNA674048 21197 191 1.464789 2.79774699 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 50.4 3.58e-5   NR XP_002999084.1 403677 g20994 i0 46.3 1.61780104712042 54 29 84.8 0 162 1 798 851 XP_002999084.1 uncharacterized protein PITG_05441 [Phytophthora infestans T30-4] diamond 309 50.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
32516496 32516496 PRJNA674048_P_NODE_29819_length_165_cov_1.793103_g29616_i0 PRJNA674048 29819 165 1.793103 2.95861995 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 73.9 1.27e-13   NR XP_012202126.1 695850 g29616 i0 61.8 18 55 21 100 0 1 165 216 270 XP_012202126.1 hypothetical protein SPRG_07742 [Saprolegnia parasitica CBS 223.65] diamond 2970 73.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
32591484 32591484 PRJNA674048_P_NODE_26799_length_169_cov_1.733333_g26596_i0 PRJNA674048 26799 169 1.733333 2.92933277 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 91.7 8.12e-20   NR KAF0736723.1 100861 g26596 i0 74.5 10.5976331360947 55 14 97.6 0 5 169 610 664 KAF0736723.1 hypothetical protein Ae201684_007170 [Aphanomyces euteiches] diamond 1791 92.4 0.992424242424242 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;