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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 16 ✖

tax_kingdom 1

bioproject 1

  • PRJNA674048 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9571543 9571543 PRJNA674048_P_NODE_12108_length_264_cov_1.846512_g11905_i0 PRJNA674048 12108 264 1.846512 4.87479168 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 63.9 1.65e-9   NR MBI5544626.1 2026735 g11905 i0 61 0.931818181818182 41 16 46.6 0 260 138 409 449 MBI5544626.1 choice-of-anchor D domain-containing protein [Deltaproteobacteria bacterium] diamond 246 63.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27156535 27156535 PRJNA674048_P_NODE_32942_length_162_cov_0.920354_g32739_i0 PRJNA674048 32942 162 0.920354 1.49097348 Myxococcia 32015 Bacteria Bacteria 105 1.32e-24   NR MBK8214522.1 2026763 g32739 i0 90.6 2.94444444444444 53 5 98.1 0 3 161 56 108 MBK8214522.1 cytochrome-c oxidase, cbb3-type subunit I [Myxococcales bacterium] diamond 477 105 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27315105 27315105 PRJNA674048_P_NODE_28083_length_168_cov_0.873950_g27880_i0 PRJNA674048 28083 168 0.87395 1.468236 Myxococcia 32015 Bacteria Bacteria 83.2 7.28e-17   NR MBK6461654.1 2026763 g27880 i0 86.7 4.01785714285714 45 6 80.4 0 3 137 499 543 MBK6461654.1 VWA domain-containing protein [Myxococcales bacterium] diamond 675 83.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27682352 27682352 PRJNA674048_P_NODE_22204_length_187_cov_1.130435_g22001_i0 PRJNA674048 22204 187 1.130435 2.11391345 Myxococcales bacterium 2026763 Bacteria Bacteria 57.4 1.22e-7   NR MBR58503.1 2026763 g22001 i0 46.6 2.71122994652406 58 31 93 0 177 4 49 106 MBR58503.1 hypothetical protein [Myxococcales bacterium] diamond 507 57.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28566017 28566017 PRJNA674048_P_NODE_29327_length_166_cov_0.888889_g29124_i0 PRJNA674048 29327 166 0.888889 1.47555574 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 41.6 0.0339   NR MBI5016073.1 2026735 g29124 i0 50 0.795180722891566 44 22 79.5 0 153 22 1 44 MBI5016073.1 IS30 family transposase [Deltaproteobacteria bacterium] diamond 132 41.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29418433 29418433 PRJNA674048_P_NODE_29529_length_166_cov_0.888889_g29326_i0 PRJNA674048 29529 166 0.888889 1.47555574 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 46.6 3.84e-4   NR MCP4668401.1 2026735 g29326 i0 47.3 0.993975903614458 55 24 99.4 2 166 2 65 114 MCP4668401.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 165 46.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30030583 30030583 PRJNA674048_P_NODE_23151_length_183_cov_1.164179_g22948_i0 PRJNA674048 23151 183 1.164179 2.13044757 Myxococcia 32015 Bacteria Bacteria 62.4 1.91e-9   NR WP_120582518.1 83461 g22948 i0 70 3.29508196721311 40 12 65.6 0 5 124 135 174 WP_120582518.1 MULTISPECIES: FG-GAP-like repeat-containing protein [Corallococcus] diamond 603 62.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus  
30681838 30681838 PRJNA674048_P_NODE_28873_length_167_cov_0.881356_g28670_i0 PRJNA674048 28873 167 0.881356 1.47186452 Myxococcales bacterium 2026763 Bacteria Bacteria 70.1 1.44e-12   NR MBK6460594.1 2026763 g28670 i0 67.9 1.0059880239521 56 16 98.8 2 3 167 154 208 MBK6460594.1 hypothetical protein [Myxococcales bacterium] diamond 168 70.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31420908 31420908 PRJNA674048_P_NODE_28056_length_168_cov_0.873950_g27853_i0 PRJNA674048 28056 168 0.87395 1.468236 Pseudomonadati 3379134 Bacteria Bacteria 60.1 1.06e-8   NR MBM4286409.1 2026735 g27853 i0 55.4 3.01785714285714 56 21 92.9 1 168 13 518 573 MBM4286409.1 tetratricopeptide repeat protein [Deltaproteobacteria bacterium] diamond 507 60.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31598959 31598959 PRJNA674048_P_NODE_24916_length_176_cov_1.417323_g24713_i0 PRJNA674048 24916 176 1.4173230000000001 2.49448848 Myxococcales bacterium 2026763 Bacteria Bacteria 67 4.17e-11   NR MBL91504.1 2026763 g24713 i0 70 0.681818181818182 40 12 68.2 0 8 127 1 40 MBL91504.1 hypothetical protein [Myxococcales bacterium] diamond 120 67 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31642158 31642158 PRJNA674048_P_NODE_20156_length_196_cov_2.122449_g19953_i0 PRJNA674048 20156 196 2.122449 4.16000004 Bacteria 2 Bacteria Bacteria 50.4 3.89e-5   NR TMA37635.1 2026735 g19953 i0 62.2 1.10204081632653 37 14 56.6 0 2 112 318 354 TMA37635.1 MAG: DNRLRE domain-containing protein [Deltaproteobacteria bacterium] diamond 216 50.8 0.992125984251969 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31820045 31820045 PRJNA674048_P_NODE_26557_length_170_cov_1.595041_g26354_i0 PRJNA674048 26557 170 1.595041 2.7115697 Myxococcales bacterium 2026763 Bacteria Bacteria 43.9 0.00176   NR MBL9112786.1 2026763 g26354 i0 88.5 0.917647058823529 26 3 45.9 0 78 1 1 26 MBL9112786.1 50S ribosomal protein L1 [Myxococcales bacterium] diamond 156 43.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31926980 31926980 PRJNA674048_P_NODE_32717_length_162_cov_0.920354_g32514_i0 PRJNA674048 32717 162 0.920354 1.49097348 Myxococcia 32015 Bacteria Bacteria 89 8.54e-21   NR MBX3227242.1 1971228 g32514 i0 80.8 9.62962962962963 52 10 96.3 0 162 7 5 56 MBX3227242.1 50S ribosomal protein L9 [Labilithrix sp.] diamond 1560 89.4 0.995525727069351 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
32326808 32326808 PRJNA674048_P_NODE_29499_length_166_cov_0.888889_g29296_i0 PRJNA674048 29499 166 0.888889 1.47555574 Anaeromyxobacter terrae 2925406 Bacteria Bacteria 62.8 8.18e-10   NR WP_279426582.1 2925406 g29296 i0 48.1 0.975903614457831 54 28 97.6 0 1 162 123 176 WP_279426582.1 glycosyltransferase family 2 protein [Anaeromyxobacter terrae] diamond 162 62.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter terrae
32389685 32389685 PRJNA674048_P_NODE_30679_length_164_cov_1.582609_g30476_i0 PRJNA674048 30679 164 1.582609 2.59547876 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 49.7 1.83e-5   NR MBM4265247.1 2026735 g30476 i0 51.9 1.90243902439024 52 18 95.1 3 160 5 98 142 MBM4265247.1 nuclear transport factor 2 family protein [Deltaproteobacteria bacterium] diamond 312 49.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32642159 32642159 PRJNA674048_P_NODE_29660_length_166_cov_0.888889_g29457_i0 PRJNA674048 29660 166 0.888889 1.47555574 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 62.8 1.08e-9   NR MCH9687017.1 2026735 g29457 i0 60.4 1.82530120481928 48 19 86.7 0 164 21 405 452 MCH9687017.1 protein kinase [Deltaproteobacteria bacterium] diamond 303 62.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;