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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8296325 8296325 PRJNA674048_P_NODE_10247_length_294_cov_1.636735_g10044_i0 PRJNA674048 10247 294 1.636735 4.8120009 Eukaryota 2759 Plants Plants 178 8.979999999999999e-52   NR BAK23239.1 940905 g10044 i0 83.7 24 98 16 100 0 1 294 188 285 BAK23239.1 eukaryotic translation elongation factor 1 alpha [Boodlea coacta] diamond 7056 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Boodleaceae Boodlea Boodlea coacta
9571629 9571629 PRJNA674048_P_NODE_2648_length_705_cov_2.557927_g2487_i0 PRJNA674048 2648 705 2.557927 18.03338535 Chlorophyta 3041 Plants Plants 350 1.4899999999999999e-115   NR YP_009646614.1 88271 g2487 i0 69.7 16.9659574468085 234 67 99.6 1 703 2 293 522 YP_009646614.1 cytochrome c oxidase subunit 1 [Picocystis salinarum] diamond 11961 350 1 Eukaryota   Viridiplantae Chlorophyta Picocystophyceae Picocystales Picocystaceae Picocystis Picocystis salinarum
17221079 17221079 PRJNA674048_P_NODE_13974_length_241_cov_1.968750_g13771_i0 PRJNA674048 13974 241 1.96875 4.7446875 Sphaeropleales 35491 Plants Plants 137 4.59e-40   NR XP_013890906.1 145388 g13771 i0 83.3 6.79668049792531 78 13 97.1 0 239 6 6 83 XP_013890906.1 40S ribosomal protein S4-C [Monoraphidium neglectum] diamond 1638 138 0.992753623188406 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
19770062 19770062 PRJNA674048_P_NODE_3996_length_546_cov_2.022133_g3799_i0 PRJNA674048 3996 546 2.022133 11.04084618 Eukaryota 2759 Plants Plants 284 4.2299999999999997e-94   NR XP_001693710.1 3055 g3799 i0 74 8.93956043956044 181 47 99.5 0 544 2 29 209 XP_001693710.1 ribosomal protein S3a [Chlamydomonas reinhardtii] diamond 4881 285 0.996491228070175 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24869240 24869240 PRJNA674048_P_NODE_16480_length_219_cov_2.317647_g16277_i0 PRJNA674048 16480 219 2.317647 5.07564693 Chloropicon roscoffensis 1461544 Plants Plants 99 7.46e-23   NR WZN61821.1 1461544 g16277 i0 65.6 2.53424657534247 61 21 83.6 0 12 194 258 318 WZN61821.1 cathepsin B cysteine protease [Chloropicon roscoffensis] diamond 555 99 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon roscoffensis
26796956 26796956 PRJNA674048_P_NODE_18121_length_208_cov_1.635220_g17918_i0 PRJNA674048 18121 208 1.63522 3.4012576 Pedinophyceae sp. YPF-7 765719 Plants Plants 55.5 5.6e-7   NR CAG9461842.1 765719 g17918 i0 64.9 0.533653846153846 37 13 53.4 0 206 96 221 257 CAG9461842.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 111 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
26796958 26796958 PRJNA674048_P_NODE_30581_length_164_cov_1.808696_g30378_i0 PRJNA674048 30581 164 1.808696 2.96626144 Symbiochloris irregularis 706552 Plants Plants 58.9 2.46e-8   NR KAK9808489.1 706552 g30378 i0 88.2 0.621951219512195 34 4 62.2 0 3 104 43 76 KAK9808489.1 hypothetical protein WJX73_000788 [Symbiochloris irregularis] diamond 102 58.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
26903985 26903985 PRJNA674048_P_NODE_21861_length_188_cov_1.496403_g21658_i0 PRJNA674048 21861 188 1.496403 2.81323764 Eukaryota 2759 Plants Plants 46.6 7.98e-4   NR PSC69766.1 554055 g21658 i0 42.9 1.88297872340426 56 24 76.6 2 42 185 760 815 PSC69766.1 pro convertase subtilisin kexin type 5-like [Micractinium conductrix] diamond 354 47 0.991489361702128 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Micractinium Micractinium conductrix
26986719 26986719 PRJNA674048_P_NODE_29642_length_166_cov_0.888889_g29439_i0 PRJNA674048 29642 166 0.888889 1.47555574 Volvox africanus 51714 Plants Plants 43.9 0.00509   NR GIL49005.1 51714 g29439 i0 40.7 0.975903614457831 54 31 97.6 1 163 2 154 206 GIL49005.1 hypothetical protein Vafri_5494, partial [Volvox africanus] diamond 162 43.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
27062047 27062047 PRJNA674048_P_NODE_29302_length_166_cov_0.888889_g29099_i0 PRJNA674048 29302 166 0.888889 1.47555574 Eukaryota 2759 Plants Plants 89.7 2.9e-19   NR KAK2078202.1 3111 g29099 i0 70.9 9.93975903614458 55 16 99.4 0 165 1 43 97 KAK2078202.1 Rab GDP dissociation inhibitor beta [Prototheca wickerhamii] diamond 1650 89.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
27946516 27946516 PRJNA674048_P_NODE_30145_length_165_cov_0.896552_g29942_i0 PRJNA674048 30145 165 0.896552 1.4793108 Eukaryota 2759 Plants Plants 73.2 2.35e-13   NR GFH08902.1 44745 g29942 i0 68.6 5.27272727272727 51 16 92.7 0 11 163 38 88 GFH08902.1 uncharacterized protein HaLaN_03944 [Haematococcus lacustris] diamond 870 73.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Haematococcaceae Haematococcus Haematococcus lacustris
28250194 28250194 PRJNA674048_P_NODE_6466_length_396_cov_1.927954_g6263_i0 PRJNA674048 6466 396 1.927954 7.63469784 Coccomyxa viridis 1274662 Plants Plants 162 9.56e-45   NR CAL5225195.1 1274662 g6263 i0 67 5.95454545454545 112 37 84.8 0 394 59 240 351 CAL5225195.1 g7978 [Coccomyxa viridis] diamond 2358 162 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
29146681 29146681 PRJNA674048_P_NODE_10889_length_283_cov_1.115385_g10686_i0 PRJNA674048 10889 283 1.115385 3.15653955 Chlorophyta 3041 Plants Plants 138 1.45e-36   NR KAK3250066.1 36881 g10686 i0 69.7 2.83038869257951 89 27 94.3 0 282 16 34 122 KAK3250066.1 hypothetical protein CYMTET_40537 [Cymbomonas tetramitiformis] diamond 801 139 0.992805755395683 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
29702350 29702350 PRJNA674048_P_NODE_5410_length_448_cov_2.596491_g5207_i0 PRJNA674048 5410 448 2.596491 11.63227968 Dunaliella salina 3046 Plants Plants 67 2.64e-11   NR KAF5829190.1 3046 g5207 i0 60.8 1.64732142857143 51 20 34.2 0 444 292 48 98 KAF5829190.1 component of cytosolic 80S ribosome and 40S small subunit [Dunaliella salina] diamond 738 67 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
29797310 29797310 PRJNA674048_P_NODE_22831_length_184_cov_1.459259_g22628_i0 PRJNA674048 22831 184 1.459259 2.68503656 Cymbomonas tetramitiformis 36881 Plants Plants 92.4 5.4e-20   NR KAK3272978.1 36881 g22628 i0 66.7 0.978260869565217 60 20 97.8 0 2 181 530 589 KAK3272978.1 hypothetical protein CYMTET_18759 [Cymbomonas tetramitiformis] diamond 180 92.4 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
30524077 30524077 PRJNA674048_P_NODE_29513_length_166_cov_0.888889_g29310_i0 PRJNA674048 29513 166 0.888889 1.47555574 Chlorella sorokiniana 3076 Plants Plants 58.2 1.54e-8   NR PRW57226.1 3076 g29310 i0 54 11.2409638554217 50 23 90.4 0 153 4 52 101 PRW57226.1 60S ribosomal L18a-2 [Chlorella sorokiniana] diamond 1866 58.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30840038 30840038 PRJNA674048_P_NODE_24674_length_177_cov_1.234375_g24471_i0 PRJNA674048 24674 177 1.234375 2.18484375 Chloropicon roscoffensis 1461544 Plants Plants 74.3 1.09e-13   NR WZN60194.1 1461544 g24471 i0 59.6 0.966101694915254 57 16 96.6 2 172 2 238 287 WZN60194.1 papain cysteine proteinase [Chloropicon roscoffensis] diamond 171 74.3 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloropicon Chloropicon roscoffensis
31504041 31504041 PRJNA674048_P_NODE_31716_length_163_cov_0.912281_g31513_i0 PRJNA674048 31716 163 0.912281 1.48701803 Chlamydomonas sp. UWO 241 1653778 Plants Plants 75.9 2.07e-14   NR KAG1666165.1 1653778 g31513 i0 70.8 4.58282208588957 48 14 88.3 0 18 161 32 79 KAG1666165.1 hypothetical protein FOA52_011577 [Chlamydomonas sp. UWO 241] diamond 747 75.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
32326810 32326810 PRJNA674048_P_NODE_32559_length_162_cov_0.920354_g32356_i0 PRJNA674048 32559 162 0.920354 1.49097348 Micromonas commoda 296587 Plants Plants 51.2 3.39e-6   NR XP_002503077.1 296587 g32356 i0 47.2 0.981481481481482 53 25 98.1 1 162 4 4 53 XP_002503077.1 predicted protein [Micromonas commoda] diamond 159 51.2 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;