contig_metadata
21 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21045702 | 21045702 | PRJNA674048_P_NODE_30097_length_165_cov_0.896552_g29894_i0 | PRJNA674048 | 30097 | 165 | 0.896552 | 1.4793108 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 106 | 2.63e-27 | NR | MCX7827560.1 | 2499141 | g29894 | i0 | 100 | 1 | 55 | 0 | 100 | 0 | 1 | 165 | 62 | 116 | MCX7827560.1 SLC13 family permease [Verrucomicrobiia bacterium] | diamond | 165 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 26765270 | 26765270 | PRJNA674048_P_NODE_30881_length_164_cov_0.904348_g30678_i0 | PRJNA674048 | 30881 | 164 | 0.904348 | 1.48313072 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 39.7 | 0.0334 | NR | MBP5285696.1 | 2212473 | g30678 | i0 | 40.4 | 1.04268292682927 | 57 | 23 | 91.5 | 5 | 163 | 14 | 22 | 74 | MBP5285696.1 alpha-L-rhamnosidase [Kiritimatiellia bacterium] | diamond | 171 | 39.7 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27018477 | 27018477 | PRJNA674048_P_NODE_24922_length_176_cov_1.354331_g24719_i0 | PRJNA674048 | 24922 | 176 | 1.354331 | 2.38362256 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 53.5 | 2.38e-6 | NR | MFO1006751.1 | 2026779 | g24719 | i0 | 52.5 | 1.00568181818182 | 59 | 27 | 98.9 | 1 | 1 | 174 | 1439 | 1497 | MFO1006751.1 Ig-like domain-containing protein [Planctomycetaceae bacterium] | diamond | 177 | 53.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 27018479 | 27018479 | PRJNA674048_P_NODE_33642_length_156_cov_2.542056_g33439_i0 | PRJNA674048 | 33642 | 156 | 2.542056 | 3.96560736 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 102 | 7.8e-24 | NR | MBN9691045.1 | 2026799 | g33439 | i0 | 96.1 | 0.980769230769231 | 51 | 2 | 98.1 | 0 | 155 | 3 | 12 | 62 | MBN9691045.1 efflux transporter outer membrane subunit [Verrucomicrobiota bacterium] | diamond | 153 | 102 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27682353 | 27682353 | PRJNA674048_P_NODE_31704_length_163_cov_0.912281_g31501_i0 | PRJNA674048 | 31704 | 163 | 0.912281 | 1.48701803 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 62.4 | 1.48e-9 | NR | MCZ6735150.1 | 2026780 | g31501 | i0 | 56.6 | 0.975460122699387 | 53 | 23 | 97.5 | 0 | 1 | 159 | 209 | 261 | MCZ6735150.1 integrin alpha [Planctomycetota bacterium] | diamond | 159 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27839680 | 27839680 | PRJNA674048_P_NODE_17204_length_214_cov_1.890909_g17001_i0 | PRJNA674048 | 17204 | 214 | 1.890909 | 4.04654526 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 44.3 | 0.0072 | NR | MBU1128693.1 | 2035772 | g17001 | i0 | 35.6 | 0.827102803738318 | 59 | 35 | 82.7 | 1 | 36 | 212 | 358 | 413 | MBU1128693.1 B12-binding domain-containing radical SAM protein [Candidatus Omnitrophota bacterium] | diamond | 177 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 28293706 | 28293706 | PRJNA674048_P_NODE_29566_length_166_cov_0.888889_g29363_i0 | PRJNA674048 | 29566 | 166 | 0.888889 | 1.47555574 | Rubinisphaera | 1649490 | Bacteria | Bacteria | 100 | 2.5e-23 | NR | MCA8987869.1 | 2026779 | g29363 | i0 | 94.3 | 2.87349397590361 | 53 | 3 | 95.8 | 0 | 164 | 6 | 322 | 374 | MCA8987869.1 rod shape-determining protein RodA [Planctomycetaceae bacterium] | diamond | 477 | 101 | 0.99009900990099 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 28786904 | 28786904 | PRJNA674048_P_NODE_31987_length_163_cov_0.912281_g31784_i0 | PRJNA674048 | 31987 | 163 | 0.912281 | 1.48701803 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 94 | 2.8400000000000003e-21 | NR | HVR65458.1 | 2499141 | g31784 | i0 | 78.8 | 0.957055214723926 | 52 | 11 | 95.7 | 0 | 162 | 7 | 101 | 152 | HVR65458.1 agmatinase [Verrucomicrobiia bacterium] | diamond | 156 | 94 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 28976675 | 28976675 | PRJNA674048_P_NODE_32748_length_162_cov_0.920354_g32545_i0 | PRJNA674048 | 32748 | 162 | 0.920354 | 1.49097348 | Thalassoglobus polymorphus | 2527994 | Bacteria | Bacteria | 110 | 1.24e-26 | NR | WP_197441640.1 | 2527994 | g32545 | i0 | 86.5 | 0.962962962962963 | 52 | 7 | 96.3 | 0 | 160 | 5 | 635 | 686 | WP_197441640.1 neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein [Thalassoglobus polymorphus] | diamond | 156 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Thalassoglobus | Thalassoglobus polymorphus | |
| 29134637 | 29134637 | PRJNA674048_P_NODE_31849_length_163_cov_0.912281_g31646_i0 | PRJNA674048 | 31849 | 163 | 0.912281 | 1.48701803 | Rubinisphaera italica | 2527969 | Bacteria | Bacteria | 76.3 | 1.34e-14 | NR | WP_146503456.1 | 2527969 | g31646 | i0 | 67.9 | 0.975460122699387 | 53 | 17 | 97.5 | 0 | 1 | 159 | 269 | 321 | WP_146503456.1 signal peptide peptidase SppA [Rubinisphaera italica] | diamond | 159 | 76.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Rubinisphaera | Rubinisphaera italica | |
| 29967381 | 29967381 | PRJNA674048_P_NODE_23391_length_182_cov_1.406015_g23188_i0 | PRJNA674048 | 23391 | 182 | 1.406015 | 2.5589473 | Bacteria | 2 | Bacteria | Bacteria | 62.4 | 1.7e-9 | NR | MCA9090848.1 | 2026779 | g23188 | i0 | 47.5 | 1.92857142857143 | 59 | 31 | 97.3 | 0 | 181 | 5 | 10 | 68 | MCA9090848.1 TauD/TfdA family dioxygenase [Planctomycetaceae bacterium] | diamond | 351 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30472953 | 30472953 | PRJNA674048_P_NODE_24713_length_177_cov_1.007812_g24510_i0 | PRJNA674048 | 24713 | 177 | 1.007812 | 1.78382724 | Bacteria | 2 | Bacteria | Bacteria | 101 | 2.39e-23 | NR | HSY54503.1 | 2006848 | g24510 | i0 | 81 | 5.89830508474576 | 58 | 11 | 98.3 | 0 | 176 | 3 | 32 | 89 | HSY54503.1 transketolase [Opitutaceae bacterium] | diamond | 1044 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30555497 | 30555497 | PRJNA674048_P_NODE_27233_length_169_cov_0.866667_g27030_i0 | PRJNA674048 | 27233 | 169 | 0.866667 | 1.46466723 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 86.7 | 4.46e-18 | NR | MBA3315149.1 | 2026779 | g27030 | i0 | 81.8 | 0.976331360946746 | 55 | 10 | 97.6 | 0 | 3 | 167 | 244 | 298 | MBA3315149.1 ATP-binding cassette domain-containing protein [Planctomycetaceae bacterium] | diamond | 165 | 86.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 30555500 | 30555500 | PRJNA674048_P_NODE_31173_length_164_cov_0.904348_g30970_i0 | PRJNA674048 | 31173 | 164 | 0.904348 | 1.48313072 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 41.2 | 0.0445 | NR | MBS0658504.1 | 2026799 | g30970 | i0 | 43.9 | 0.75 | 41 | 23 | 75 | 0 | 2 | 124 | 177 | 217 | MBS0658504.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 123 | 41.2 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31725190 | 31725190 | PRJNA674048_P_NODE_12197_length_263_cov_0.971963_g11994_i0 | PRJNA674048 | 12197 | 263 | 0.971963 | 2.55626269 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 121 | 5.35e-33 | NR | MCP5470421.1 | 2047757 | g11994 | i0 | 70.9 | 1.97338403041825 | 86 | 25 | 98.1 | 0 | 2 | 259 | 31 | 116 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 519 | 121 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31788319 | 31788319 | PRJNA674048_P_NODE_9737_length_303_cov_1.385827_g9534_i0 | PRJNA674048 | 9737 | 303 | 1.385827 | 4.19905581 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 62.8 | 7.13e-9 | NR | MEK6799202.1 | 2026780 | g9534 | i0 | 63.4 | 0.831683168316832 | 41 | 15 | 40.6 | 0 | 298 | 176 | 1568 | 1608 | MEK6799202.1 EGF domain-containing protein [Planctomycetota bacterium] | diamond | 252 | 62.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31851665 | 31851665 | PRJNA674048_P_NODE_31997_length_163_cov_0.912281_g31794_i0 | PRJNA674048 | 31997 | 163 | 0.912281 | 1.48701803 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 41.6 | 0.0317 | NR | GJM20625.1 | 2026780 | g31794 | i0 | 51.2 | 0.791411042944785 | 43 | 21 | 79.1 | 0 | 134 | 6 | 173 | 215 | GJM20625.1 MAG: hypothetical protein DHS20C15_05400 [Planctomycetota bacterium] | diamond | 129 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32010053 | 32010053 | PRJNA674048_P_NODE_31998_length_163_cov_0.912281_g31795_i0 | PRJNA674048 | 31998 | 163 | 0.912281 | 1.48701803 | Rubinisphaera sp. JC75 | 2024857 | Bacteria | Bacteria | 91.7 | 4.3700000000000005e-21 | NR | WP_237226502.1 | 2898658 | g31795 | i0 | 78.8 | 1.91411042944785 | 52 | 11 | 95.7 | 0 | 158 | 3 | 92 | 143 | WP_237226502.1 bL17 family ribosomal protein [Rubinisphaera sp. JC750] | diamond | 312 | 91.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Rubinisphaera | Rubinisphaera sp. JC750 | |
| 32168422 | 32168422 | PRJNA674048_P_NODE_11918_length_267_cov_1.192661_g11715_i0 | PRJNA674048 | 11918 | 267 | 1.192661 | 3.18440487 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 43.5 | 0.027 | NR | HUE72001.1 | 2699754 | g11715 | i0 | 32.4 | 0.831460674157303 | 74 | 47 | 83.1 | 1 | 5 | 226 | 965 | 1035 | HUE72001.1 hypothetical protein [Pirellulaceae bacterium] | diamond | 222 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 32168427 | 32168427 | PRJNA674048_P_NODE_29138_length_166_cov_1.444444_g28935_i0 | PRJNA674048 | 29138 | 166 | 1.444444 | 2.39777704 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 62.4 | 8.56e-10 | NR | MDA7977157.1 | 2715253 | g28935 | i0 | 65.5 | 0.993975903614458 | 55 | 19 | 99.4 | 0 | 2 | 166 | 165 | 219 | MDA7977157.1 slipin family protein [Pirellulales bacterium] | diamond | 165 | 62.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 32168428 | 32168428 | PRJNA674048_P_NODE_30798_length_164_cov_0.904348_g30595_i0 | PRJNA674048 | 30798 | 164 | 0.904348 | 1.48313072 | Blastopirellula sp. J2-11 | 2943192 | Bacteria | Bacteria | 41.6 | 0.0335 | NR | WP_262024013.1 | 2943192 | g30595 | i0 | 46.3 | 0.98780487804878 | 54 | 27 | 95.1 | 1 | 5 | 160 | 1288 | 1341 | WP_262024013.1 hypothetical protein [Blastopirellula sp. J2-11] | diamond | 162 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Blastopirellula | Blastopirellula sp. J2-11 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;