contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA674048" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28408242 | 28408242 | PRJNA674048_P_NODE_27046_length_169_cov_0.866667_g26843_i0 | PRJNA674048 | 27046 | 169 | 0.866667 | 1.46466723 | Trypanosoma cruzi | 5693 | Euglenozoa | other_Eukaryota | 82.8 | 5.26e-17 | NR | EKG02707.1 | 5693 | g26843 | i0 | 72.7 | 2.92899408284024 | 55 | 15 | 97.6 | 0 | 2 | 166 | 27 | 81 | EKG02707.1 protein kinase A catalytic subunit, putative [Trypanosoma cruzi] | diamond | 495 | 82.8 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma cruzi | ||
| 28660871 | 28660871 | PRJNA674048_P_NODE_17347_length_213_cov_2.085366_g17144_i0 | PRJNA674048 | 17347 | 213 | 2.085366 | 4.44182958 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 81.6 | 4.19e-17 | NR | ACI15910.1 | 75058 | g17144 | i0 | 66.2 | 1 | 71 | 20 | 97.2 | 3 | 1 | 207 | 137 | 205 | ACI15910.1 Rab1 [Bodo saltans] | diamond | 213 | 81.6 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 30757208 | 30757208 | PRJNA674048_P_NODE_27734_length_168_cov_0.873950_g27531_i0 | PRJNA674048 | 27734 | 168 | 0.87395 | 1.468236 | Kinetoplastea | 5653 | Euglenozoa | other_Eukaryota | 44.7 | 0.00107 | NR | CUG08503.1 | 75058 | g27531 | i0 | 79.3 | 2.07142857142857 | 29 | 6 | 51.8 | 0 | 2 | 88 | 103 | 131 | CUG08503.1 60S ribosomal protein L32, putative [Bodo saltans] | diamond | 348 | 44.7 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans | ||
| 32642158 | 32642158 | PRJNA674048_P_NODE_29400_length_166_cov_0.888889_g29197_i0 | PRJNA674048 | 29400 | 166 | 0.888889 | 1.47555574 | Bodo saltans | 75058 | Euglenozoa | other_Eukaryota | 71.6 | 8.53e-13 | NR | CUG03896.1 | 75058 | g29197 | i0 | 64.2 | 0.957831325301205 | 53 | 19 | 95.8 | 0 | 2 | 160 | 417 | 469 | CUG03896.1 choline transporter, putative [Bodo saltans] | diamond | 159 | 71.6 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Eubodonida | Bodonidae | Bodo | Bodo saltans |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;