contig_metadata
58 rows where analysis = "diamond", bioproject = "PRJNA672101" and tax_kingdom = "Pseudomonadati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4469640 | 4469640 | PRJNA672101_S_NODE_10664_length_342_cov_6.576208_g10633_i0 | PRJNA672101 | 10664 | 342 | 6.576208 | 22.49063136 | Pseudoxanthomonas winnipegensis | 2480810 | Bacteria | Bacteria | 223 | 1.19e-69 | NR | WP_131659043.1 | 2480810 | g10633 | i0 | 100 | 1 | 114 | 0 | 100 | 0 | 1 | 342 | 189 | 302 | WP_131659043.1 hypothetical protein [Pseudoxanthomonas winnipegensis] | diamond | 342 | 223 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Pseudoxanthomonas | Pseudoxanthomonas winnipegensis | ||
| 5745398 | 5745398 | PRJNA672101_S_NODE_23925_length_268_cov_2.369231_g23894_i0 | PRJNA672101 | 23925 | 268 | 2.369231 | 6.34953908 | Rhizorhabdus sp. | 1968843 | Bacteria | Bacteria | 103 | 7.01e-25 | NR | WP_296536046.1 | 1968843 | g23894 | i0 | 100 | 0.593283582089552 | 53 | 0 | 59.3 | 0 | 202 | 44 | 1 | 53 | WP_296536046.1 cistern family PEP-CTERM protein [Rhizorhabdus sp.] | diamond | 159 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Rhizorhabdus | Rhizorhabdus sp. | ||
| 7020466 | 7020466 | PRJNA672101_S_NODE_20086_length_285_cov_1.594340_g20055_i0 | PRJNA672101 | 20086 | 285 | 1.59434 | 4.543869 | Methylotenera | 359407 | Bacteria | Bacteria | 172 | 1.87e-53 | NR | HAJ70630.1 | 2030816 | g20055 | i0 | 96.7 | 2.84210526315789 | 90 | 3 | 94.7 | 0 | 14 | 283 | 1 | 90 | HAJ70630.1 rod shape-determining protein [Methylophilaceae bacterium] | diamond | 810 | 172 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilaceae bacterium | |||
| 13396227 | 13396227 | PRJNA672101_S_NODE_8691_length_360_cov_2.414634_g8660_i0 | PRJNA672101 | 8691 | 360 | 2.414634 | 8.6926824 | Hyphomicrobium sp. | 82 | Bacteria | Bacteria | 100 | 8.56e-22 | NR | MBR2534990.1 | 82 | g8660 | i0 | 100 | 0.441666666666667 | 53 | 0 | 44.2 | 0 | 240 | 82 | 898 | 950 | MBR2534990.1 tandem-95 repeat protein [Hyphomicrobium sp.] | diamond | 159 | 100 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiaceae | Hyphomicrobium | Hyphomicrobium sp. | ||
| 26638486 | 26638486 | PRJNA672101_S_NODE_13741_length_320_cov_2.182186_g13710_i0 | PRJNA672101 | 13741 | 320 | 2.182186 | 6.9829952 | Elusimicrobiota bacterium | 2030800 | Bacteria | Bacteria | 62.4 | 1.23e-8 | NR | MFH1724591.1 | 2030800 | g13710 | i0 | 40.7 | 0.80625 | 86 | 48 | 77.8 | 3 | 272 | 24 | 2632 | 2717 | MFH1724591.1 SMP-30/gluconolactonase/LRE family protein [Elusimicrobiota bacterium] | diamond | 258 | 62.4 | 1 | Bacteria | Pseudomonadati | Elusimicrobiota | Elusimicrobiota bacterium | ||||||
| 26796935 | 26796935 | PRJNA672101_S_NODE_8061_length_366_cov_2.976109_g8030_i0 | PRJNA672101 | 8061 | 366 | 2.976109 | 10.89255894 | Methylobacterium | 407 | Bacteria | Bacteria | 184 | 4.06e-51 | NR | WP_007564036.1 | 407 | g8030 | i0 | 100 | 0.80327868852459 | 98 | 0 | 80.3 | 0 | 364 | 71 | 227 | 324 | WP_007564036.1 MULTISPECIES: MobF family relaxase [Methylobacterium] | diamond | 294 | 184 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | |||
| 26860570 | 26860570 | PRJNA672101_S_NODE_12401_length_329_cov_4.511719_g12370_i0 | PRJNA672101 | 12401 | 329 | 4.511719 | 14.84355551 | Hyphomicrobium sp. | 82 | Bacteria | Bacteria | 218 | 2.3599999999999993e-68 | NR | MBR2537300.1 | 82 | g12370 | i0 | 100 | 0.993920972644377 | 109 | 0 | 99.4 | 0 | 3 | 329 | 27 | 135 | MBR2537300.1 protein-methionine-sulfoxide reductase catalytic subunit MsrP [Hyphomicrobium sp.] | diamond | 327 | 218 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiaceae | Hyphomicrobium | Hyphomicrobium sp. | ||
| 26860571 | 26860571 | PRJNA672101_S_NODE_8881_length_358_cov_4.003509_g8850_i0 | PRJNA672101 | 8881 | 358 | 4.003509 | 14.33256222 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 49.7 | 4.87e-4 | NR | HEX4067606.1 | 2052142 | g8850 | i0 | 47.9 | 0.402234636871508 | 48 | 25 | 40.2 | 0 | 280 | 137 | 55 | 102 | HEX4067606.1 tetratricopeptide repeat protein [Acidobacteriaceae bacterium] | diamond | 144 | 49.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 26872546 | 26872546 | PRJNA672101_S_NODE_28041_length_252_cov_4.301676_g28010_i0 | PRJNA672101 | 28041 | 252 | 4.301676 | 10.84022352 | Bacteria | 2 | Bacteria | Bacteria | 96.7 | 7.84e-24 | NR | MCY2994908.1 | 2026780 | g28010 | i0 | 56.6 | 7.79761904761905 | 83 | 34 | 98.8 | 2 | 249 | 1 | 7 | 87 | MCY2994908.1 NADP-dependent oxidoreductase [Planctomycetota bacterium] | diamond | 1965 | 97.4 | 0.992813141683778 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27018452 | 27018452 | PRJNA672101_S_NODE_27602_length_254_cov_1.701657_g27571_i0 | PRJNA672101 | 27602 | 254 | 1.701657 | 4.32220878 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 107 | 3.56e-25 | NR | MBL8862461.1 | 2026780 | g27571 | i0 | 72.2 | 0.850393700787402 | 72 | 20 | 85 | 0 | 3 | 218 | 196 | 267 | MBL8862461.1 hypothetical protein [Planctomycetota bacterium] | diamond | 216 | 107 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27018453 | 27018453 | PRJNA672101_S_NODE_34262_length_232_cov_6.748428_g34231_i0 | PRJNA672101 | 34262 | 232 | 6.748428 | 15.65635296 | Escherichia coli | 562 | Bacteria | Bacteria | 93.6 | 5.77e-22 | NR | WP_140424235.1 | 562 | g34231 | i0 | 60 | 5.625 | 75 | 30 | 97 | 0 | 231 | 7 | 94 | 168 | WP_140424235.1 ADP-ribosylation factor-like protein, partial [Escherichia coli] | diamond | 1305 | 93.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27050231 | 27050231 | PRJNA672101_S_NODE_22462_length_274_cov_2.845771_g22431_i0 | PRJNA672101 | 22462 | 274 | 2.845771 | 7.79741254 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 42 | 0.0318 | NR | WP_395588934.1 | 251699 | g22431 | i0 | 66.7 | 0.394160583941606 | 36 | 9 | 39.4 | 1 | 5 | 112 | 12 | 44 | WP_395588934.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 108 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27081736 | 27081736 | PRJNA672101_S_NODE_18542_length_292_cov_2.141553_g18511_i0 | PRJNA672101 | 18542 | 292 | 2.141553 | 6.25333476 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 42.7 | 0.046 | NR | WP_395568454.1 | 251699 | g18511 | i0 | 62.3 | 0.544520547945205 | 53 | 8 | 45.2 | 5 | 42 | 173 | 123 | 172 | WP_395568454.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 159 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27283384 | 27283384 | PRJNA672101_S_NODE_12403_length_329_cov_4.375000_g12372_i0 | PRJNA672101 | 12403 | 329 | 4.375 | 14.39375 | Bacteria | 2 | Bacteria | Bacteria | 124 | 1.23e-32 | NR | MBI3651923.1 | 1978231 | g12372 | i0 | 73.3 | 1.3677811550152 | 75 | 20 | 68.4 | 0 | 227 | 3 | 187 | 261 | MBI3651923.1 class II aldolase/adducin family protein [Acidobacteriota bacterium] | diamond | 450 | 124 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27303125 | 27303125 | PRJNA672101_S_NODE_5463_length_400_cov_1.883792_g5432_i0 | PRJNA672101 | 5463 | 400 | 1.883792 | 7.535168 | Bradyrhizobium sp. | 376 | Bacteria | Bacteria | 117 | 8.91e-30 | NR | MBA4033449.1 | 376 | g5432 | i0 | 98.5 | 0.5025 | 67 | 1 | 50.3 | 0 | 394 | 194 | 1 | 67 | MBA4033449.1 hypothetical protein [Bradyrhizobium sp.] | diamond | 201 | 117 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. | ||
| 27303126 | 27303126 | PRJNA672101_S_NODE_7183_length_376_cov_4.323432_g7152_i0 | PRJNA672101 | 7183 | 376 | 4.323432 | 16.25610432 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 45.8 | 0.00613 | NR | WP_395587226.1 | 251699 | g7152 | i0 | 45.9 | 0.590425531914894 | 74 | 34 | 55.1 | 3 | 69 | 275 | 30 | 102 | WP_395587226.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 222 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27461087 | 27461087 | PRJNA672101_S_NODE_26023_length_260_cov_1.647059_g25992_i0 | PRJNA672101 | 26023 | 260 | 1.647059 | 4.2823534 | Candidatus Kinetoplastibacterium galatii | 994695 | Bacteria | Bacteria | 73.9 | 4.6e-13 | NR | WP_015389678.1 | 994695 | g25992 | i0 | 48.1 | 1.82307692307692 | 79 | 41 | 91.2 | 0 | 22 | 258 | 363 | 441 | WP_015389678.1 NADH-quinone oxidoreductase subunit N [Candidatus Kinetoplastibacterium galatii] | diamond | 474 | 73.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Candidatus Kinetoplastidibacterium | Candidatus Kinetoplastidibacterium galati | ||||
| 27902811 | 27902811 | PRJNA672101_S_NODE_35245_length_209_cov_5.029412_g35214_i0 | PRJNA672101 | 35245 | 209 | 5.029412 | 10.51147108 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 47.4 | 9.53e-5 | NR | WP_395514420.1 | 251699 | g35214 | i0 | 51.8 | 0.803827751196172 | 56 | 11 | 60.3 | 4 | 2 | 127 | 27 | 80 | WP_395514420.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 168 | 47.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27914783 | 27914783 | PRJNA672101_S_NODE_6525_length_384_cov_3.932476_g6494_i0 | PRJNA672101 | 6525 | 384 | 3.932476 | 15.10070784 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 70.9 | 2.47e-11 | NR | HWI85154.1 | 28214 | g6494 | i0 | 70.5 | 2.015625 | 44 | 13 | 34.4 | 0 | 2 | 133 | 440 | 483 | HWI85154.1 NAD(P)/FAD-dependent oxidoreductase [Sphingomonas sp.] | diamond | 774 | 71.6 | 0.990223463687151 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 27934632 | 27934632 | PRJNA672101_S_NODE_22665_length_273_cov_6.520000_g22634_i0 | PRJNA672101 | 22665 | 273 | 6.52 | 17.7996 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 49.3 | 2.17e-4 | NR | MET0287607.1 | 3034171 | g22634 | i0 | 32.6 | 2.9010989010989 | 89 | 53 | 94.5 | 2 | 273 | 16 | 164 | 248 | MET0287607.1 N-formylglutamate amidohydrolase [Polyangiales bacterium] | diamond | 792 | 49.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 27997876 | 27997876 | PRJNA672101_S_NODE_18505_length_292_cov_3.063927_g18474_i0 | PRJNA672101 | 18505 | 292 | 3.063927 | 8.94666684 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 47.4 | 8.71e-4 | NR | WP_395569355.1 | 251699 | g18474 | i0 | 58.2 | 0.565068493150685 | 55 | 14 | 48.3 | 4 | 2 | 142 | 119 | 172 | WP_395569355.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 165 | 47.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 28566000 | 28566000 | PRJNA672101_S_NODE_22527_length_274_cov_1.721393_g22496_i0 | PRJNA672101 | 22527 | 274 | 1.721393 | 4.71661682 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 60.5 | 2.42e-9 | NR | MDH5694345.1 | 1913989 | g22496 | i0 | 58.3 | 2.62773722627737 | 60 | 24 | 65.7 | 1 | 1 | 180 | 58 | 116 | MDH5694345.1 NADH-quinone oxidoreductase subunit A [Gammaproteobacteria bacterium] | diamond | 720 | 60.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 28578037 | 28578037 | PRJNA672101_S_NODE_9747_length_350_cov_4.444043_g9716_i0 | PRJNA672101 | 9747 | 350 | 4.444043 | 15.5541505 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 51.6 | 9.46e-5 | NR | MBS1857945.1 | 1978231 | g9716 | i0 | 55.1 | 0.84 | 49 | 22 | 42 | 0 | 147 | 1 | 381 | 429 | MBS1857945.1 collagen-like protein [Acidobacteriota bacterium] | diamond | 294 | 51.6 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28850030 | 28850030 | PRJNA672101_S_NODE_18168_length_294_cov_1.497738_g18137_i0 | PRJNA672101 | 18168 | 294 | 1.497738 | 4.40334972 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 81.6 | 6.05e-16 | NR | MCZ6684305.1 | 2026780 | g18137 | i0 | 45 | 1.02040816326531 | 100 | 49 | 95.9 | 2 | 294 | 13 | 60 | 159 | MCZ6684305.1 6-bladed beta-propeller [Planctomycetota bacterium] | diamond | 300 | 81.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28881711 | 28881711 | PRJNA672101_S_NODE_17308_length_298_cov_4.271111_g17277_i0 | PRJNA672101 | 17308 | 298 | 4.271111 | 12.72791078 | Methylobacterium sp. | 409 | Bacteria | Bacteria | 153 | 6.469999999999999e-45 | NR | WP_292494019.1 | 409 | g17277 | i0 | 98.7 | 0.785234899328859 | 78 | 1 | 78.5 | 0 | 235 | 2 | 1 | 78 | WP_292494019.1 hypothetical protein [Methylobacterium sp.] | diamond | 234 | 153 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. | ||
| 28945214 | 28945214 | PRJNA672101_S_NODE_22088_length_276_cov_1.482759_g22057_i0 | PRJNA672101 | 22088 | 276 | 1.482759 | 4.09241484 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 43.5 | 0.0272 | NR | MFH7495021.1 | 129140 | g22057 | i0 | 49.4 | 1.65217391304348 | 79 | 21 | 76.1 | 7 | 63 | 272 | 143 | 211 | MFH7495021.1 hypothetical protein [Pseudomonas syringae pv. tagetis] | diamond | 456 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 28976649 | 28976649 | PRJNA672101_S_NODE_20408_length_283_cov_4.261905_g20377_i0 | PRJNA672101 | 20408 | 283 | 4.261905 | 12.06119115 | Methylobacterium goesingense | 243690 | Bacteria | Bacteria | 146 | 5.82e-39 | NR | WP_238282574.1 | 243690 | g20377 | i0 | 92.9 | 0.890459363957597 | 84 | 6 | 89 | 0 | 2 | 253 | 471 | 554 | WP_238282574.1 OFA family MFS transporter [Methylobacterium goesingense] | diamond | 252 | 146 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium goesingense | ||
| 29102946 | 29102946 | PRJNA672101_S_NODE_11868_length_333_cov_2.565385_g11837_i0 | PRJNA672101 | 11868 | 333 | 2.565385 | 8.54273205 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 44.7 | 0.00789 | NR | WP_395586696.1 | 251699 | g11837 | i0 | 45.1 | 0.81981981981982 | 91 | 31 | 75.7 | 5 | 44 | 295 | 2 | 80 | WP_395586696.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 273 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29102947 | 29102947 | PRJNA672101_S_NODE_9208_length_355_cov_3.549645_g9177_i0 | PRJNA672101 | 9208 | 355 | 3.549645 | 12.60123975 | Hymenobacter piscis | 2839984 | Bacteria | Bacteria | 176 | 4.38e-54 | NR | WP_215594636.1 | 2839984 | g9177 | i0 | 74.6 | 0.963380281690141 | 114 | 29 | 96.3 | 0 | 344 | 3 | 1 | 114 | WP_215594636.1 hypothetical protein [Hymenobacter piscis] | diamond | 342 | 176 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter piscis | |
| 29134616 | 29134616 | PRJNA672101_S_NODE_12449_length_329_cov_1.894531_g12418_i0 | PRJNA672101 | 12449 | 329 | 1.894531 | 6.23300699 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 49.7 | 1.27e-4 | NR | WP_395586652.1 | 251699 | g12418 | i0 | 48.9 | 0.802431610942249 | 88 | 24 | 72.9 | 7 | 49 | 288 | 81 | 155 | WP_395586652.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 264 | 49.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29166162 | 29166162 | PRJNA672101_S_NODE_15609_length_308_cov_3.242553_g15578_i0 | PRJNA672101 | 15609 | 308 | 3.242553 | 9.98706324 | Methylobacterium sp. | 409 | Bacteria | Bacteria | 111 | 9.78e-27 | NR | WP_286965347.1 | 409 | g15578 | i0 | 78.9 | 2.96103896103896 | 76 | 16 | 74 | 0 | 2 | 229 | 166 | 241 | WP_286965347.1 RNA-guided endonuclease InsQ/TnpB family protein [Methylobacterium sp.] | diamond | 912 | 111 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. | ||
| 29166163 | 29166163 | PRJNA672101_S_NODE_25029_length_264_cov_1.554974_g24998_i0 | PRJNA672101 | 25029 | 264 | 1.554974 | 4.10513136 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 41.6 | 0.0406 | NR | WP_395573865.1 | 251699 | g24998 | i0 | 50.6 | 0.920454545454545 | 81 | 29 | 88.6 | 7 | 31 | 264 | 19 | 91 | WP_395573865.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 243 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29166164 | 29166164 | PRJNA672101_S_NODE_7129_length_377_cov_2.437500_g7098_i0 | PRJNA672101 | 7129 | 377 | 2.4375 | 9.189375 | Hyphomicrobium sp. | 82 | Bacteria | Bacteria | 254 | 3.8400000000000005e-79 | NR | MBR2535512.1 | 82 | g7098 | i0 | 100 | 0.994694960212202 | 125 | 0 | 99.5 | 0 | 1 | 375 | 392 | 516 | MBR2535512.1 glycosyltransferase family 39 protein [Hyphomicrobium sp.] | diamond | 375 | 254 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Hyphomicrobiaceae | Hyphomicrobium | Hyphomicrobium sp. | ||
| 29229320 | 29229320 | PRJNA672101_S_NODE_5009_length_407_cov_3.973054_g4978_i0 | PRJNA672101 | 5009 | 407 | 3.973054 | 16.17032978 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 44.7 | 0.0374 | NR | WP_395573647.1 | 251699 | g4978 | i0 | 56.8 | 0.597051597051597 | 81 | 22 | 57.5 | 7 | 143 | 376 | 87 | 157 | WP_395573647.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 243 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29292217 | 29292217 | PRJNA672101_S_NODE_6349_length_386_cov_24.303514_g6318_i0 | PRJNA672101 | 6349 | 386 | 24.303514 | 93.81156404 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 44.7 | 0.0154 | NR | MFH7611336.1 | 129140 | g6318 | i0 | 68.3 | 0.318652849740933 | 41 | 11 | 30.3 | 2 | 2 | 118 | 53 | 93 | MFH7611336.1 hypothetical protein [Pseudomonas syringae pv. tagetis] | diamond | 123 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29323734 | 29323734 | PRJNA672101_S_NODE_16729_length_301_cov_6.412281_g16698_i0 | PRJNA672101 | 16729 | 301 | 6.412281 | 19.30096581 | Candidatus Hydrogenedentota bacterium | 2030809 | Bacteria | Bacteria | 43.1 | 0.0485 | NR | MFO7975924.1 | 2030809 | g16698 | i0 | 31.3 | 0.667774086378738 | 67 | 46 | 66.8 | 0 | 254 | 54 | 83 | 149 | MFO7975924.1 DUF1080 domain-containing protein [Candidatus Hydrogenedentota bacterium] | diamond | 201 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Hydrogenedentota | Candidatus Hydrogenedentota bacterium | |||||
| 29323735 | 29323735 | PRJNA672101_S_NODE_21309_length_279_cov_3.500000_g21278_i0 | PRJNA672101 | 21309 | 279 | 3.5 | 9.765 | Methylotenera sp. | 2051956 | Bacteria | Bacteria | 72.4 | 2.86e-13 | NR | WP_304890572.1 | 2051956 | g21278 | i0 | 81.6 | 1.75268817204301 | 38 | 7 | 40.9 | 0 | 195 | 82 | 4 | 41 | WP_304890572.1 flavin reductase family protein [Methylotenera sp.] | diamond | 489 | 72.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylotenera | Methylotenera sp. | ||
| 29323736 | 29323736 | PRJNA672101_S_NODE_22909_length_272_cov_2.703518_g22878_i0 | PRJNA672101 | 22909 | 272 | 2.703518 | 7.35356896 | Acinetobacter baumannii | 470 | Bacteria | Bacteria | 42.7 | 0.0146 | NR | MDC4452273.1 | 470 | g22878 | i0 | 58.2 | 0.606617647058823 | 55 | 14 | 58.5 | 2 | 163 | 5 | 50 | 97 | MDC4452273.1 hypothetical protein [Acinetobacter baumannii] | diamond | 165 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 29607601 | 29607601 | PRJNA672101_S_NODE_10570_length_343_cov_2.903704_g10539_i0 | PRJNA672101 | 10570 | 343 | 2.903704 | 9.95970472 | Mesorhizobium sp. | 1871066 | Bacteria | Bacteria | 42.4 | 0.0178 | NR | WP_292382237.1 | 1871066 | g10539 | i0 | 34 | 0.411078717201166 | 47 | 31 | 41.1 | 0 | 242 | 102 | 5 | 51 | WP_292382237.1 tyrosine-type recombinase/integrase [Mesorhizobium sp.] | diamond | 141 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium sp. | ||
| 30144595 | 30144595 | PRJNA672101_S_NODE_33872_length_237_cov_4.225610_g33841_i0 | PRJNA672101 | 33872 | 237 | 4.22561 | 10.0146957 | Methylorubrum aminovorans | 269069 | Bacteria | Bacteria | 143 | 8.059999999999998e-42 | NR | WP_238229158.1 | 269069 | g33841 | i0 | 84.8 | 1 | 79 | 12 | 100 | 0 | 237 | 1 | 5 | 83 | WP_238229158.1 hypothetical protein [Methylorubrum aminovorans] | diamond | 237 | 143 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylorubrum | Methylorubrum aminovorans | ||
| 30144596 | 30144596 | PRJNA672101_S_NODE_5932_length_392_cov_4.849530_g5901_i0 | PRJNA672101 | 5932 | 392 | 4.84953 | 19.0101576 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 67 | 1.99e-11 | NR | MBV9576583.1 | 1913989 | g5901 | i0 | 41.6 | 0.681122448979592 | 89 | 50 | 66.6 | 1 | 302 | 42 | 20 | 108 | MBV9576583.1 MC/SLC25 family protein [Gammaproteobacteria bacterium] | diamond | 267 | 67 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 30176429 | 30176429 | PRJNA672101_S_NODE_15352_length_310_cov_1.624473_g15321_i0 | PRJNA672101 | 15352 | 310 | 1.624473 | 5.0358663 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 43.1 | 0.0359 | NR | PCJ66719.1 | 1898104 | g15321 | i0 | 45.5 | 0.425806451612903 | 44 | 18 | 42.6 | 1 | 121 | 252 | 40 | 77 | PCJ66719.1 MAG: YbhB/YbcL family Raf kinase inhibitor-like protein [Bacteroidota bacterium] | diamond | 132 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 30207826 | 30207826 | PRJNA672101_S_NODE_14172_length_317_cov_2.704918_g14141_i0 | PRJNA672101 | 14172 | 317 | 2.704918 | 8.57459006 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 81.6 | 1.94e-15 | NR | MEC9032943.1 | 2026780 | g14141 | i0 | 50.6 | 4.94006309148265 | 79 | 38 | 74.8 | 1 | 29 | 265 | 532 | 609 | MEC9032943.1 Kazal-type serine protease inhibitor domain-containing protein [Planctomycetota bacterium] | diamond | 1566 | 81.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30429671 | 30429671 | PRJNA672101_S_NODE_12833_length_326_cov_2.849802_g12802_i0 | PRJNA672101 | 12833 | 326 | 2.849802 | 9.29035452 | Rhodothermales bacterium | 2306054 | Bacteria | Bacteria | 49.3 | 2.14e-4 | NR | MBO6574973.1 | 2306054 | g12802 | i0 | 25.6 | 2.21779141104294 | 125 | 68 | 92 | 3 | 2 | 301 | 26 | 150 | MBO6574973.1 DUF1648 domain-containing protein [Rhodothermales bacterium] | diamond | 723 | 49.3 | 1 | Bacteria | FCB group | Pseudomonadati | Rhodothermota | Rhodothermia | Rhodothermales | Rhodothermales bacterium | |||
| 30599066 | 30599066 | PRJNA672101_S_NODE_16233_length_304_cov_4.333333_g16202_i0 | PRJNA672101 | 16233 | 304 | 4.333333 | 13.17333232 | Flavobacteriaceae | 49546 | Bacteria | Bacteria | 62 | 1.29e-8 | NR | WP_298138967.1 | 239 | g16202 | i0 | 57.4 | 3.65131578947368 | 54 | 22 | 53.3 | 1 | 304 | 143 | 92 | 144 | WP_298138967.1 asparagine synthase (glutamine-hydrolyzing) [Flavobacterium sp.] | diamond | 1110 | 62.4 | 0.993589743589744 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. | |
| 30618789 | 30618789 | PRJNA672101_S_NODE_5793_length_394_cov_3.956386_g5762_i0 | PRJNA672101 | 5793 | 394 | 3.956386 | 15.58816084 | Alphaproteobacteria bacterium | 1913988 | Bacteria | Bacteria | 43.5 | 0.0332 | NR | MCE9521735.1 | 1913988 | g5762 | i0 | 30.1 | 0.631979695431472 | 83 | 52 | 62.4 | 2 | 88 | 333 | 29 | 106 | MCE9521735.1 energy transducer TonB [Alphaproteobacteria bacterium] | diamond | 249 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Alphaproteobacteria bacterium | |||||
| 30776945 | 30776945 | PRJNA672101_S_NODE_16914_length_300_cov_5.374449_g16883_i0 | PRJNA672101 | 16914 | 300 | 5.374449 | 16.123347 | Enterobacteriaceae endosymbiont of Donacia cincticornis | 2675773 | Bacteria | Bacteria | 49.3 | 2.66e-5 | NR | WP_168894038.1 | 2675773 | g16883 | i0 | 46.3 | 1.04 | 54 | 29 | 54 | 0 | 275 | 114 | 4 | 57 | WP_168894038.1 30S ribosomal protein S16 [Enterobacteriaceae endosymbiont of Donacia cincticornis] | diamond | 312 | 49.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacteriaceae endosymbiont of Donacia cincticornis | |||
| 30934916 | 30934916 | PRJNA672101_S_NODE_13074_length_324_cov_5.649402_g13043_i0 | PRJNA672101 | 13074 | 324 | 5.649402 | 18.30406248 | Candidatus Thiodiazotropha sp. | 2847306 | Bacteria | Bacteria | 122 | 2.0299999999999997e-31 | NR | MET0066935.1 | 2847306 | g13043 | i0 | 53.5 | 6.51851851851852 | 101 | 47 | 93.5 | 0 | 2 | 304 | 175 | 275 | MET0066935.1 TIM barrel protein [Candidatus Thiodiazotropha sp.] | diamond | 2112 | 122 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Sedimenticolaceae | Candidatus Thiodiazotropha | Candidatus Thiodiazotropha sp. | ||
| 31187255 | 31187255 | PRJNA672101_S_NODE_7535_length_372_cov_3.227425_g7504_i0 | PRJNA672101 | 7535 | 372 | 3.227425 | 12.006021 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 45.8 | 0.00459 | NR | MFH7444956.1 | 129140 | g7504 | i0 | 52.7 | 1.61290322580645 | 91 | 21 | 66.1 | 7 | 20 | 265 | 35 | 112 | MFH7444956.1 hypothetical protein [Pseudomonas syringae pv. tagetis] | diamond | 600 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 31282354 | 31282354 | PRJNA672101_S_NODE_7775_length_369_cov_6.081081_g7744_i0 | PRJNA672101 | 7775 | 369 | 6.081081 | 22.43918889 | Hymenobacter pini | 2880879 | Bacteria | Bacteria | 206 | 6.27e-59 | NR | WP_226271418.1 | 2880879 | g7744 | i0 | 88.6 | 1 | 123 | 14 | 100 | 0 | 369 | 1 | 6 | 128 | WP_226271418.1 SusC/RagA family TonB-linked outer membrane protein [Hymenobacter pini] | diamond | 369 | 206 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter pini | |
| 31409022 | 31409022 | PRJNA672101_S_NODE_21936_length_276_cov_6.108374_g21905_i0 | PRJNA672101 | 21936 | 276 | 6.108374 | 16.85911224 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 56.6 | 6.85e-7 | NR | HWZ89911.1 | 2268199 | g21905 | i0 | 62.5 | 0.521739130434783 | 48 | 17 | 51.1 | 1 | 272 | 132 | 361 | 408 | HWZ89911.1 glycoside hydrolase family protein [Polyangiaceae bacterium] | diamond | 144 | 56.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31598938 | 31598938 | PRJNA672101_S_NODE_19576_length_287_cov_3.219626_g19545_i0 | PRJNA672101 | 19576 | 287 | 3.219626 | 9.24032662 | Methylobacterium sp. | 409 | Bacteria | Bacteria | 176 | 4.759999999999999e-54 | NR | WP_299658392.1 | 409 | g19545 | i0 | 95.7 | 0.982578397212544 | 94 | 4 | 98.3 | 0 | 1 | 282 | 79 | 172 | WP_299658392.1 DUF1465 family protein [Methylobacterium sp.] | diamond | 282 | 176 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. | ||
| 31598939 | 31598939 | PRJNA672101_S_NODE_4376_length_419_cov_18.222543_g4345_i0 | PRJNA672101 | 4376 | 419 | 18.222543 | 76.35245517 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 47.8 | 0.00308 | NR | MFH7422399.1 | 129140 | g4345 | i0 | 36.7 | 0.859188544152745 | 120 | 33 | 72.3 | 6 | 33 | 335 | 13 | 108 | MFH7422399.1 hypothetical protein [Pseudomonas syringae pv. tagetis] | diamond | 360 | 47.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 31661826 | 31661826 | PRJNA672101_S_NODE_28977_length_250_cov_1.135593_g28946_i0 | PRJNA672101 | 28977 | 250 | 1.135593 | 2.8389825 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 43.9 | 0.0149 | NR | WP_395514332.1 | 251699 | g28946 | i0 | 45.8 | 0.864 | 72 | 21 | 76.8 | 5 | 28 | 219 | 141 | 202 | WP_395514332.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 216 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 31756860 | 31756860 | PRJNA672101_S_NODE_22197_length_275_cov_4.861386_g22166_i0 | PRJNA672101 | 22197 | 275 | 4.861386 | 13.3688115 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 50.8 | 7.71e-5 | NR | MBN1354056.1 | 2035772 | g22166 | i0 | 42.9 | 0.763636363636364 | 70 | 37 | 73.1 | 1 | 1 | 201 | 520 | 589 | MBN1354056.1 molecular chaperone DnaK [Candidatus Omnitrophota bacterium] | diamond | 210 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 32021972 | 32021972 | PRJNA672101_S_NODE_30118_length_247_cov_3.982759_g30087_i0 | PRJNA672101 | 30118 | 247 | 3.982759 | 9.83741473 | Flavobacterium | 237 | Bacteria | Bacteria | 71.6 | 5.78e-13 | NR | WP_078227953.1 | 1938609 | g30087 | i0 | 49.2 | 3.06072874493927 | 63 | 30 | 76.5 | 1 | 1 | 189 | 154 | 214 | WP_078227953.1 HAD family hydrolase [Flavobacterium sp. LM4] | diamond | 756 | 71.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sp. LM4 | |
| 32136648 | 32136648 | PRJNA672101_S_NODE_32898_length_242_cov_0.911243_g32867_i0 | PRJNA672101 | 32898 | 242 | 0.911243 | 2.20520806 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 42.7 | 0.0151 | NR | WP_395587763.1 | 251699 | g32867 | i0 | 48.1 | 0.979338842975207 | 79 | 30 | 90.5 | 5 | 7 | 225 | 41 | 114 | WP_395587763.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 237 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 32453249 | 32453249 | PRJNA672101_S_NODE_32639_length_242_cov_2.609467_g32608_i0 | PRJNA672101 | 32639 | 242 | 2.609467 | 6.31491014 | Zoogloea sp. | 49181 | Bacteria | Bacteria | 149 | 5.42e-45 | NR | WP_296413115.1 | 49181 | g32608 | i0 | 91.3 | 0.991735537190083 | 80 | 7 | 99.2 | 0 | 1 | 240 | 1 | 80 | WP_296413115.1 hypothetical protein [Zoogloea sp.] | diamond | 240 | 149 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Zoogloea | Zoogloea sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;