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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA672101" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 23 ✖

bioproject 1

  • PRJNA672101 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24868380 24868380 PRJNA672101_S_NODE_8860_length_358_cov_5.315789_g8829_i0 PRJNA672101 8860 358 5.315789 19.03052462 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99 6.21e-24   NR XP_003294985.1 5786 g8829 i0 66.7 13.8184357541899 75 25 62.8 0 2 226 34 108 XP_003294985.1 uncharacterized protein DICPUDRAFT_59352 [Dictyostelium purpureum] diamond 4947 99.4 0.995975855130785 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26606704 26606704 PRJNA672101_S_NODE_8441_length_362_cov_6.138408_g8410_i0 PRJNA672101 8441 362 6.138408 22.22103696 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99 3.0300000000000003e-21   NR XP_004339415.1 1257118 g8410 i0 58 2.22099447513812 88 35 72.9 2 4 267 1451 1536 XP_004339415.1 RhoGEF domain containing protein, partial [Acanthamoeba castellanii str. Neff] diamond 804 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27271375 27271375 PRJNA672101_S_NODE_13243_length_323_cov_3.576000_g13212_i0 PRJNA672101 13243 323 3.576 11.55048 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 76.3 1.64e-13   NR PRP87716.1 1890364 g13212 i0 41 0.928792569659443 100 58 92.9 1 13 312 597 695 PRP87716.1 hypothetical protein PROFUN_02416 [Planoprotostelium fungivorum] diamond 300 76.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27587372 27587372 PRJNA672101_S_NODE_10084_length_347_cov_6.277372_g10053_i0 PRJNA672101 10084 347 6.277372 21.78248084 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 108 6.11e-25   NR PRP83932.1 1890364 g10053 i0 42.9 0.968299711815562 112 58 96.8 3 5 340 135 240 PRP83932.1 LIM-type zinc finger-containing protein [Planoprotostelium fungivorum] diamond 336 108 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27587375 27587375 PRJNA672101_S_NODE_5004_length_407_cov_4.422156_g4973_i0 PRJNA672101 5004 407 4.422156 17.99817492 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 54.7 1.42e-5   NR XP_012751907.1 1410327 g4973 i0 46.7 0.442260442260442 60 32 44.2 0 2 181 449 508 XP_012751907.1 hypothetical protein SAMD00019534_085620 [Acytostelium subglobosum LB1] diamond 180 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27682331 27682331 PRJNA672101_S_NODE_5064_length_406_cov_4.123123_g5033_i0 PRJNA672101 5064 406 4.123123 16.73987938 Heterostelium album PN5 2086695 Evosea other_Eukaryota 61.2 7.75e-8   NR XP_020433141.1 670386 g5033 i0 44.1 0.435960591133005 59 33 43.6 0 230 406 687 745 XP_020433141.1 hypothetical protein PPL_05858 [Heterostelium album PN500] diamond 177 61.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28060789 28060789 PRJNA672101_S_NODE_7445_length_373_cov_3.690000_g7414_i0 PRJNA672101 7445 373 3.69 13.7637 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 78.6 2.83e-15   NR PRP86189.1 1890364 g7414 i0 63.9 1.49597855227882 61 22 49.1 0 142 324 114 174 PRP86189.1 prefoldin subunit 3-like isoform 1 [Planoprotostelium fungivorum] diamond 558 78.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28072721 28072721 PRJNA672101_S_NODE_6305_length_387_cov_3.490446_g6274_i0 PRJNA672101 6305 387 3.490446 13.50802602 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 125 2.05e-30   NR XP_004366393.1 261658 g6274 i0 49.6 5.4031007751938 115 57 88.4 1 3 344 1578 1692 XP_004366393.1 ATP-dependent RNA helicase [Cavenderia fasciculata] diamond 2091 125 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28692563 28692563 PRJNA672101_S_NODE_6387_length_386_cov_3.466454_g6356_i0 PRJNA672101 6387 386 3.466454 13.38051244 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 51.2 1.46e-4   NR KAH3731996.1 1580589 g6356 i0 60 0.544041450777202 35 14 27.2 0 213 317 232 266 KAH3731996.1 Protein YIPF6 [Pelomyxa schiedti] diamond 210 51.2 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29355510 29355510 PRJNA672101_S_NODE_14789_length_313_cov_5.233333_g14758_i0 PRJNA672101 14789 313 5.233333 16.38033229 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 78.2 2.85e-14   NR XP_004334498.1 1257118 g14758 i0 40 0.958466453674121 100 48 95.8 2 308 9 310 397 XP_004334498.1 uncharacterized protein ACA1_330890, partial [Acanthamoeba castellanii str. Neff] diamond 300 78.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29481369 29481369 PRJNA672101_S_NODE_34430_length_230_cov_3.127389_g34399_i0 PRJNA672101 34430 230 3.127389 7.1929947 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 51.6 2.41e-5   NR KAH3745909.1 1580589 g34399 i0 43.3 1.74782608695652 60 34 78.3 0 196 17 1547 1606 KAH3745909.1 golgin subfamily B member 1 [Pelomyxa schiedti] diamond 402 51.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29702325 29702325 PRJNA672101_S_NODE_9670_length_351_cov_2.442446_g9639_i0 PRJNA672101 9670 351 2.442446 8.57298546 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 95.5 1.47e-20   NR XP_635157.1 352472 g9639 i0 43.5 0.923076923076923 108 60 91.5 1 329 9 10 117 XP_635157.1 hypothetical protein DDB_G0291350 [Dictyostelium discoideum AX4] diamond 324 95.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29765695 29765695 PRJNA672101_S_NODE_13251_length_323_cov_3.080000_g13220_i0 PRJNA672101 13251 323 3.08 9.9484 Entamoeba histolytica HM-1:IMSS 294381 Evosea other_Eukaryota 141 1.01e-40   NR XP_654543.1 294381 g13220 i0 61.6 0.919504643962848 99 38 92 0 321 25 35 133 XP_654543.1 uncharacterized protein EHI_092320 [Entamoeba histolytica HM-1:IMSS] diamond 297 141 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
29765696 29765696 PRJNA672101_S_NODE_5951_length_392_cov_2.736677_g5920_i0 PRJNA672101 5951 392 2.736677 10.72777384 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 112 8.710000000000001e-26   NR XP_012756717.1 1410327 g5920 i0 44.2 0.918367346938776 120 66 91.1 1 389 33 1210 1329 XP_012756717.1 hypothetical protein SAMD00019534_031300 [Acytostelium subglobosum LB1] diamond 360 112 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
30049989 30049989 PRJNA672101_S_NODE_23391_length_270_cov_3.385787_g23360_i0 PRJNA672101 23391 270 3.385787 9.1416249 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62.4 6.53e-9   NR PRP88073.1 1890364 g23360 i0 44.8 0.744444444444444 67 37 74.4 0 70 270 886 952 PRP88073.1 hypothetical protein PROFUN_04164 [Planoprotostelium fungivorum] diamond 201 62.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31199068 31199068 PRJNA672101_S_NODE_19355_length_288_cov_3.581395_g19324_i0 PRJNA672101 19355 288 3.581395 10.3144176 Dictyostelium 5782 Evosea other_Eukaryota 42.4 0.00974   NR XP_003293013.1 5786 g19324 i0 40 1.39583333333333 70 27 71.9 4 238 32 6 61 XP_003293013.1 uncharacterized protein DICPUDRAFT_157807 [Dictyostelium purpureum] diamond 402 42.7 0.992974238875878 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31440513 31440513 PRJNA672101_S_NODE_12256_length_330_cov_4.727626_g12225_i0 PRJNA672101 12256 330 4.727626 15.6011658 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.9 6.88e-4   NR XP_004367756.1 1257118 g12225 i0 35.6 0.945454545454545 104 40 70 3 326 96 77 180 XP_004367756.1 BAG domain containing protein [Acanthamoeba castellanii str. Neff] diamond 312 48.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31472391 31472391 PRJNA672101_S_NODE_8976_length_357_cov_4.063380_g8945_i0 PRJNA672101 8976 357 4.06338 14.5062666 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 1.68e-7   NR XP_004341415.1 1257118 g8945 i0 30.1 1.03361344537815 123 78 100 3 1 357 60 178 XP_004341415.1 protein kinase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 369 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31725169 31725169 PRJNA672101_S_NODE_30637_length_246_cov_3.271676_g30606_i0 PRJNA672101 30637 246 3.271676 8.04832296 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 105 1.49e-24   NR KAH3765792.1 1580589 g30606 i0 61.5 0.951219512195122 78 30 95.1 0 245 12 401 478 KAH3765792.1 Poly(ADP-ribose) polymerase, regulatory domain [Pelomyxa schiedti] diamond 234 105 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32041654 32041654 PRJNA672101_S_NODE_21178_length_280_cov_1.487923_g21147_i0 PRJNA672101 21178 280 1.487923 4.1661844 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 82.8 4.61e-16   NR PRP74799.1 1890364 g21147 i0 51.7 0.953571428571429 89 42 95.4 1 277 11 425 512 PRP74799.1 actin binding protein [Planoprotostelium fungivorum] diamond 267 82.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32231724 32231724 PRJNA672101_S_NODE_24778_length_265_cov_1.593750_g24747_i0 PRJNA672101 24778 265 1.59375 4.2234375 Dictyostelium purpureum 5786 Evosea other_Eukaryota 60.5 2.86e-8   NR XP_003290372.1 5786 g24747 i0 36 1.00754716981132 89 53 99.6 2 265 2 841 926 XP_003290372.1 uncharacterized protein DICPUDRAFT_49160 [Dictyostelium purpureum] diamond 267 60.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
32421361 32421361 PRJNA672101_S_NODE_27799_length_253_cov_2.566667_g27768_i0 PRJNA672101 27799 253 2.566667 6.49366751 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 65.9 2.97e-10   NR KAH3746090.1 1580589 g27768 i0 44 0.889328063241107 75 42 88.9 0 252 28 376 450 KAH3746090.1 transporter, major facilitator subfamily protein [Pelomyxa schiedti] diamond 225 65.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32465052 32465052 PRJNA672101_S_NODE_9419_length_353_cov_3.885714_g9388_i0 PRJNA672101 9419 353 3.885714 13.71657042 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.9 1.67e-5   NR XP_004353097.1 1257118 g9388 i0 39.1 1.4957507082153 87 52 73.9 1 328 68 2075 2160 XP_004353097.1 uncharacterized protein ACA1_071910 [Acanthamoeba castellanii str. Neff] diamond 528 53.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;