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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA670521" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA670521 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2440195 2440195 PRJNA670521_P_NODE_12562_length_511_cov_2.095890_g11826_i0 PRJNA670521 12562 511 2.09589 10.7099979 Prosthecobacter sp. 1965333 Bacteria Bacteria 258 2.49e-80   NR MCW0216825.1 1965333 g11826 i0 77.6 1.99608610567515 170 38 99.8 0 511 2 245 414 MCW0216825.1 thermosome subunit alpha [Prosthecobacter sp.] diamond 1020 258 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
3189143 3189143 PRJNA670521_P_NODE_67083_length_257_cov_1.668478_g66338_i0 PRJNA670521 67083 257 1.668478 4.28798846 Opitutaceae bacterium 2006848 Bacteria Bacteria 76.6 9.82e-15   NR HUR58326.1 2006848 g66338 i0 48.8 1.91439688715953 82 39 95.7 1 251 6 97 175 HUR58326.1 MTAP family purine nucleoside phosphorylase [Opitutaceae bacterium] diamond 492 76.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
4466326 4466326 PRJNA670521_P_NODE_80664_length_246_cov_1.381503_g79919_i0 PRJNA670521 80664 246 1.381503 3.39849738 Luteolibacter sp. AS25 3135776 Bacteria Bacteria 59.3 5.42e-8   NR WP_411827508.1 3135776 g79919 i0 68.3 1.04878048780488 41 13 50 0 125 3 4 44 WP_411827508.1 sulfatase family protein [Luteolibacter sp. AS25] diamond 258 59.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. AS25
14667357 14667357 PRJNA670521_P_NODE_78932_length_247_cov_0.885057_g78187_i0 PRJNA670521 78932 247 0.885057 2.18609079 Puniceicoccales bacterium 2478473 Bacteria Bacteria 153 4.49e-41   NR MDR2862525.1 2478473 g78187 i0 84.1 3.98380566801619 82 13 99.6 0 1 246 1109 1190 MDR2862525.1 DNA-directed RNA polymerase subunit beta [Puniceicoccales bacterium] diamond 984 153 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales     Puniceicoccales bacterium
20291393 20291393 PRJNA670521_P_NODE_87776_length_243_cov_0.905882_g87031_i0 PRJNA670521 87776 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 144 1.61e-39   NR PAW86008.1 1982324 g87031 i0 85 26.6296296296296 80 12 98.8 0 241 2 190 269 PAW86008.1 MAG: RNA helicase [Pedosphaera sp. Tous-C6FEB] diamond 6471 145 0.993103448275862 Bacteria PVC group Pseudomonadati Verrucomicrobiota Pedosphaerae Pedosphaerales Pedosphaeraceae Pedosphaera Pedosphaera sp. Tous-C6FEB
28597733 28597733 PRJNA670521_P_NODE_92567_length_241_cov_0.916667_g91822_i0 PRJNA670521 92567 241 0.916667 2.20916747 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 59.7 3.93e-8   NR MFN0127000.1 2026801 g91822 i0 49.2 0.784232365145228 63 31 77.2 1 217 32 288 350 MFN0127000.1 ankyrin repeat domain-containing protein [Verrucomicrobiales bacterium] diamond 189 59.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29513079 29513079 PRJNA670521_P_NODE_77690_length_248_cov_0.880000_g76945_i0 PRJNA670521 77690 248 0.88 2.1824 Spartobacteria bacterium 2052183 Bacteria Bacteria 45.8 3.32e-4   NR MEP6976208.1 2052183 g76945 i0 70 0.362903225806452 30 9 36.3 0 247 158 40 69 MEP6976208.1 hypothetical protein [Spartobacteria bacterium] diamond 90 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria       Spartobacteria bacterium
30915293 30915293 PRJNA670521_P_NODE_84434_length_245_cov_0.895349_g83689_i0 PRJNA670521 84434 245 0.895349 2.19360505 Verrucomicrobiota 74201 Bacteria Bacteria 100 1.81e-22   NR WP_013044052.1 395922 g83689 i0 63.8 6.97959183673469 80 27 96.7 2 245 9 685 763 WP_013044052.1 FAD-dependent oxidoreductase [Coraliomargarita akajimensis] diamond 1710 101 0.99009900990099 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Coraliomargaritaceae Coraliomargarita Coraliomargarita akajimensis
30934897 30934897 PRJNA670521_P_NODE_88554_length_243_cov_0.905882_g87809_i0 PRJNA670521 88554 243 0.905882 2.20129326 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 102 5.15e-23   NR MFO1436728.1 2026800 g87809 i0 64.6 2.97530864197531 79 28 97.5 0 239 3 2376 2454 MFO1436728.1 putative Ig domain-containing protein [Verrucomicrobiaceae bacterium] diamond 723 102 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
31598892 31598892 PRJNA670521_P_NODE_5236_length_771_cov_1.295129_g4562_i0 PRJNA670521 5236 771 1.295129 9.98544459 Prosthecobacter sp. 1965333 Bacteria Bacteria 83.2 2.65e-14   NR MCW0218190.1 1965333 g4562 i0 29.2 0.813229571984436 209 126 72.8 3 624 64 42 250 MCW0218190.1 hypothetical protein [Prosthecobacter sp.] diamond 627 83.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
32104838 32104838 PRJNA670521_P_NODE_92758_length_241_cov_0.916667_g92013_i0 PRJNA670521 92758 241 0.916667 2.20916747 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 45.8 0.00301   NR HVU09389.1 2499141 g92013 i0 55 0.49792531120332 40 18 49.8 0 233 114 3687 3726 HVU09389.1 LamG-like jellyroll fold domain-containing protein [Verrucomicrobiia bacterium] diamond 120 45.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
32168356 32168356 PRJNA670521_P_NODE_49998_length_296_cov_1.035874_g49253_i0 PRJNA670521 49998 296 1.035874 3.06618704 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 67.8 1.11e-10   NR HEX2750029.1 2026801 g49253 i0 47.2 5.35135135135135 89 41 84.1 4 260 12 669 757 HEX2750029.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 1584 67.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;