RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA670521" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA670521 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28041305 28041305 PRJNA670521_P_NODE_5_length_8668_cov_14.621640_g3_i0 PRJNA670521 5 8668 14.62164 1267.4037552 Zebrafish jaw picornavirus RQ13 Viruses Viruses 545 2.539999999999999e-153   NR ULF99604.1 RQ13 g3 i0 26.6 4.82741116751269 2338 1251 75.3 76 6913 386 310 2335 ULF99604.1 MAG: polyprotein, partial [Kobuvirus sp.] diamond 41844 548 0.994525547445255 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
28660799 28660799 PRJNA670521_P_NODE_387_length_2347_cov_3.346526_g256_i0 PRJNA670521 387 2347 3.346526 78.54296522 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 141 9.89e-31   NR UNY42191.1 3003959 g256 i0 27.9 0.521516829995739 408 245 48.7 11 500 1642 90 475 UNY42191.1 MAG: polyprotein, partial [Picornavirales sp.] diamond 1224 141 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
29177998 29177998 PRJNA670521_P_NODE_11729_length_526_cov_1.019868_g10994_i0 PRJNA670521 11729 526 1.019868 5.36450568 Viruses 10239 Viruses Viruses 72 4.63e-11   NR UNY42007.1 1955153 g10994 i0 43 2.23574144486692 93 50 52.5 2 2 277 804 894 UNY42007.1 MAG: polyprotein 2 [Picornavirales sp.] diamond 1176 72 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Picornavirales sp.
29418354 29418354 PRJNA670521_P_NODE_289_length_2640_cov_2.918582_g189_i0 PRJNA670521 289 2640 2.918582 77.0505648 Chemarfal virus 127 3062889 Viruses Viruses 107 1.61e-19   NR WPR17966.1 3062889 g189 i0 27.3 0.390909090909091 344 219 38.4 9 2249 1236 1548 1866 WPR17966.1 MAG: hypothetical protein [Chemarfal virus 127] diamond 1032 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Chemarfal virus 127

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;