RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA670521" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 18 ✖

bioproject 1

  • PRJNA670521 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10842290 10842290 PRJNA670521_P_NODE_59369_length_274_cov_1.532338_g58624_i0 PRJNA670521 59369 274 1.532338 4.19860612 Bacteria 2 Bacteria Bacteria 134 2.64e-34   NR HUZ07743.1 2053589 g58624 i0 70.8 23.6167883211679 89 26 97.4 0 267 1 215 303 HUZ07743.1 aminomethyl-transferring glycine dehydrogenase [Candidatus Paceibacterota bacterium] diamond 6471 135 0.992592592592593 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
21040698 21040698 PRJNA670521_P_NODE_51657_length_292_cov_1.054795_g50912_i0 PRJNA670521 51657 292 1.054795 3.0800014 root 1 Root_unresolved Root_unresolved 128 1.1e-35   NR KKU52863.1 1618839 g50912 i0 77.6 29.0650684931507 76 17 78.1 0 229 2 3 78 KKU52863.1 MAG: hypothetical protein UX72_C0001G0040 [Parcubacteria group bacterium GW2011_GWA2_47_10] diamond 8487 129 0.992248062015504 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWA2_47_10
27176325 27176325 PRJNA670521_P_NODE_56942_length_280_cov_1.115942_g56197_i0 PRJNA670521 56942 280 1.115942 3.1246376 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57.4 4.12e-7   NR MEZ0208986.1 2053589 g56197 i0 29.9 0.932142857142857 87 60 92.1 1 260 3 1357 1443 MEZ0208986.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 261 57.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27934582 27934582 PRJNA670521_P_NODE_44485_length_310_cov_1.299578_g43740_i0 PRJNA670521 44485 310 1.299578 4.0286918 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.9 1.36e-7   NR MEZ0209065.1 2053589 g43740 i0 36.4 0.958064516129032 99 60 95.8 2 299 3 202 297 MEZ0209065.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 297 58.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28597694 28597694 PRJNA670521_P_NODE_33467_length_346_cov_1.058608_g32722_i0 PRJNA670521 33467 346 1.058608 3.66278368 Candidatus Magasanikiibacteriota bacterium 2026717 Bacteria Bacteria 60.5 6.71e-8   NR MFA7245001.1 2026717 g32722 i0 43.9 1.04913294797688 66 37 57.2 0 338 141 139 204 MFA7245001.1 hypothetical protein [Candidatus Magasanikiibacteriota bacterium] diamond 363 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikiibacteriota bacterium
29197623 29197623 PRJNA670521_P_NODE_20169_length_420_cov_1.213256_g19426_i0 PRJNA670521 20169 420 1.213256 5.0956752 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 44.7 0.0246   NR MFA5917467.1 2044595 g19426 i0 34 0.757142857142857 106 64 72.9 3 46 351 23 126 MFA5917467.1 NYN domain-containing protein [Candidatus Altimarinota bacterium] diamond 318 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29576133 29576133 PRJNA670521_P_NODE_69730_length_251_cov_2.219101_g68985_i0 PRJNA670521 69730 251 2.219101 5.56994351 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 42.7 0.0151   NR MDE0556523.1 2026781 g68985 i0 38.9 0.860557768924303 72 38 81.3 2 246 43 57 126 MDE0556523.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 216 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30018640 30018640 PRJNA670521_P_NODE_13551_length_495_cov_2.552133_g12813_i0 PRJNA670521 13551 495 2.552133 12.63305835 Candidatus Harrisonbacteria bacterium 2528272 Bacteria Bacteria 46.2 0.0259   NR MBI2024506.1 2528272 g12813 i0 25.2 0.672727272727273 111 72 60.6 2 79 378 368 478 MBI2024506.1 hypothetical protein [Candidatus Harrisonbacteria bacterium] diamond 333 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Harrisoniibacteriota         Candidatus Harrisonbacteria bacterium
30176405 30176405 PRJNA670521_P_NODE_88072_length_243_cov_0.905882_g87327_i0 PRJNA670521 88072 243 0.905882 2.20129326 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 48.9 2.51e-4   NR MBA3724598.1 2052151 g87327 i0 42.1 1.64197530864198 57 31 70.4 1 14 184 811 865 MBA3724598.1 RNA-directed DNA polymerase [Candidatus Levyibacteriota bacterium] diamond 399 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
30713571 30713571 PRJNA670521_P_NODE_63034_length_266_cov_1.295337_g62289_i0 PRJNA670521 63034 266 1.295337 3.44559642 Parcubacteria group bacterium 2026774 Bacteria Bacteria 68.6 2.29e-12   NR MBI4127537.1 2026774 g62289 i0 61.7 3.38345864661654 60 23 67.7 0 265 86 77 136 MBI4127537.1 30S ribosomal protein S9 [Parcubacteria group bacterium] diamond 900 68.6 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium
30851917 30851917 PRJNA670521_P_NODE_81574_length_246_cov_0.890173_g80829_i0 PRJNA670521 81574 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 65.1 4.24e-10   NR OGD93678.1 1797712 g80829 i0 55.4 5.67073170731707 56 24 68.3 1 195 28 4 58 OGD93678.1 MAG: hypothetical protein A2697_01680 [Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44] diamond 1395 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Curtissiibacteriota         Candidatus Curtissbacteria bacterium RIFCSPHIGHO2_01_FULL_41_44
30871541 30871541 PRJNA670521_P_NODE_40954_length_320_cov_5.137652_g40209_i0 PRJNA670521 40954 320 5.137652 16.4404864 Candidatus Binatus sp. 2811406 Bacteria Bacteria 43.9 0.00486   NR WP_304820945.1 2811406 g40209 i0 38.5 0.609375 65 37 60.9 1 39 233 12 73 WP_304820945.1 Rdx family protein [Candidatus Binatus sp.] diamond 195 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
31041874 31041874 PRJNA670521_P_NODE_86315_length_244_cov_0.900585_g85570_i0 PRJNA670521 86315 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 87.4 6.47e-18   NR HUX35538.1 2053589 g85570 i0 58 2.92622950819672 81 34 99.6 0 244 2 72 152 HUX35538.1 ABC-F family ATP-binding cassette domain-containing protein [Candidatus Paceibacterota bacterium] diamond 714 87.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31187204 31187204 PRJNA670521_P_NODE_17795_length_443_cov_1.040541_g17053_i0 PRJNA670521 17795 443 1.040541 4.60959663 Minisyncoccota bacterium 2053589 Bacteria Bacteria 74.3 2.93e-12   NR MEZ0208921.1 2053589 g17053 i0 41.2 1.00225733634312 148 85 99.5 2 1 441 330 476 MEZ0208921.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 444 74.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31345729 31345729 PRJNA670521_P_NODE_45696_length_307_cov_1.264957_g44951_i0 PRJNA670521 45696 307 1.264957 3.88341799 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0416   NR MFA5715097.1 2053589 g44951 i0 42 0.674267100977199 69 33 67.4 2 80 286 394 455 MFA5715097.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 207 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31819996 31819996 PRJNA670521_P_NODE_71417_length_251_cov_0.865169_g70672_i0 PRJNA670521 71417 251 0.865169 2.17157419 Minisyncoccota bacterium 2053589 Bacteria Bacteria 149 1.88e-39   NR MEZ0208791.1 2053589 g70672 i0 81.9 0.99203187250996006 83 15 99.2 0 251 3 36 118 MEZ0208791.1 glucoamylase family protein [Candidatus Paceibacterota bacterium] diamond 249 149 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32295094 32295094 PRJNA670521_P_NODE_62679_length_267_cov_1.190722_g61934_i0 PRJNA670521 62679 267 1.190722 3.17922774 Minisyncoccota bacterium 2053589 Bacteria Bacteria 82 7.35e-16   NR MEZ0209064.1 2053589 g61934 i0 51.9 0.887640449438202 79 38 88.8 0 6 242 363 441 MEZ0209064.1 DNA N-6-adenine-methyltransferase [Candidatus Paceibacterota bacterium] diamond 237 82 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32894109 32894109 PRJNA670521_P_NODE_28200_length_369_cov_1.104730_g27455_i0 PRJNA670521 28200 369 1.10473 4.0764537 Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_ 2052152 Bacteria Bacteria 75.1 7.21e-13   NR OGI73429.1 1801740 g27455 i0 37.6 5.7479674796748 117 62 95.1 2 14 364 540 645 OGI73429.1 MAG: hypothetical protein A2737_01130 [Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_41_71] diamond 2121 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_41_71

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;