RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA669701" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA669701 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1164574 1164574 PRJNA669701_P_NODE_75601_length_287_cov_1.799065_g75206_i0 PRJNA669701 75601 287 1.799065 5.16331655 Acrasis kona 1008807 Heterolobosea other_Eukaryota 140 4.22e-37   NR KAL0489290.1 1008807 g75206 i0 63.2 0.993031358885017 95 35 99.3 0 286 2 124 218 KAL0489290.1 beta-glucosidase [Acrasis kona] diamond 285 140 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27599319 27599319 PRJNA669701_P_NODE_123664_length_246_cov_1.335260_g123269_i0 PRJNA669701 123664 246 1.33526 3.2847396 Naegleria 5761 Heterolobosea other_Eukaryota 97.4 9.39e-23   NR XP_044568425.1 5763 g123269 i0 55 1.98780487804878 80 35 97.6 1 244 5 71 149 XP_044568425.1 uncharacterized protein FDP41_007627 [Naegleria fowleri] diamond 489 97.8 0.995910020449898 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27776735 27776735 PRJNA669701_P_NODE_104224_length_254_cov_1.839779_g103829_i0 PRJNA669701 104224 254 1.839779 4.67303866 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 50.1 7.57e-5   NR XP_044560115.1 5763 g103829 i0 44 0.590551181102362 50 28 59.1 0 179 30 112 161 XP_044560115.1 uncharacterized protein FDP41_005396 [Naegleria fowleri] diamond 150 50.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28250053 28250053 PRJNA669701_P_NODE_133726_length_243_cov_1.458824_g133331_i0 PRJNA669701 133726 243 1.458824 3.54494232 Acrasis kona 1008807 Heterolobosea other_Eukaryota 47.4 5.39e-4   NR KAL0483930.1 1008807 g133331 i0 47.8 0.567901234567901 46 23 55.6 1 107 241 35 80 KAL0483930.1 ribosomal protein mL16 [Acrasis kona] diamond 138 47.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
28945074 28945074 PRJNA669701_P_NODE_105888_length_252_cov_2.921788_g105493_i0 PRJNA669701 105888 252 2.921788 7.36290576 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 76.3 6.56e-14   NR XP_002681022.1 5762 g105493 i0 50.6 0.94047619047619 79 34 90.5 2 244 17 601 677 XP_002681022.1 amidohydrolase family protein [Naegleria gruberi] diamond 237 76.3 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29923797 29923797 PRJNA669701_P_NODE_79771_length_282_cov_1.473684_g79376_i0 PRJNA669701 79771 282 1.473684 4.15578888 Acrasis kona 1008807 Heterolobosea other_Eukaryota 106 3.76e-25   NR KAL0490400.1 1008807 g79376 i0 51.4 1.13829787234043 107 28 89.4 4 253 2 250 355 KAL0490400.1 glucan endo-beta-glucosidase [Acrasis kona] diamond 321 106 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30176303 30176303 PRJNA669701_P_NODE_146852_length_229_cov_2.948718_g146457_i0 PRJNA669701 146852 229 2.948718 6.75256422 Acrasis kona 1008807 Heterolobosea other_Eukaryota 107 3.93e-25   NR KAL0478843.1 1008807 g146457 i0 60.6 0.930131004366812 71 28 93 0 213 1 46 116 KAL0478843.1 hypothetical protein AKO1_008253 [Acrasis kona] diamond 213 107 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30461226 30461226 PRJNA669701_P_NODE_43693_length_360_cov_1.609756_g43298_i0 PRJNA669701 43693 360 1.609756 5.7951216 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 57.8 6.86e-7   NR XP_002679255.1 5762 g43298 i0 37.5 0.733333333333333 88 54 72.5 1 4 264 20 107 XP_002679255.1 uncharacterized protein NAEGRDRAFT_2572, partial [Naegleria gruberi] diamond 264 57.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30820393 30820393 PRJNA669701_P_NODE_21474_length_507_cov_6.235023_g21079_i0 PRJNA669701 21474 507 6.235023 31.61156661 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 129 3.61e-31   NR XP_002676603.1 5762 g21079 i0 45.5 5.03550295857988 134 67 75.7 1 481 98 599 732 XP_002676603.1 uncharacterized protein NAEGRDRAFT_58186 [Naegleria gruberi] diamond 2553 129 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;