RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA666695" and tax_phylum = "Candidatus Zixiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA666695 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24114953 24114953 PRJNA666695_S_NODE_40559_length_318_cov_3.321300_g39465_i0 PRJNA666695 40559 318 3.3213 10.561734 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 147 1.31e-39   NR HOP06493.1 2053527 g39465 i0 70.5 25.7452830188679 105 28 99.1 1 3 317 97 198 HOP06493.1 F0F1 ATP synthase subunit alpha [Candidatus Zixiibacteriota bacterium] diamond 8187 147 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
28313329 28313329 PRJNA666695_S_NODE_26206_length_374_cov_18.558559_g25113_i0 PRJNA666695 26206 374 18.558559 69.40901066 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 64.7 3.27e-9   NR MBI5265766.1 2053527 g25113 i0 39.7 2.81550802139037 78 39 61.8 3 374 144 250 320 MBI5265766.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 1053 64.7 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
29304061 29304061 PRJNA666695_S_NODE_155009_length_174_cov_1.729323_g153915_i0 PRJNA666695 155009 174 1.729323 3.00902202 FCB group 1783270 Bacteria Bacteria 58.9 2.8e-8   NR MEW6411034.1 2053527 g153915 i0 50 2.51724137931034 52 26 89.7 0 17 172 1 52 MEW6411034.1 L-glutamate gamma-semialdehyde dehydrogenase [Candidatus Zixiibacteriota bacterium] diamond 438 58.9 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
30144352 30144352 PRJNA666695_S_NODE_160992_length_170_cov_2.015504_g159898_i0 PRJNA666695 160992 170 2.015504 3.4263568 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 43.5 0.00742   NR NLI14787.1 2053527 g159898 i0 43.8 0.847058823529412 48 27 84.7 0 168 25 218 265 NLI14787.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 144 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;