RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA666695" and tax_phylum = "Candidatus Culexarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Culexarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27650362 27650362 PRJNA666695_S_NODE_86384_length_235_cov_1.603093_g85290_i0 PRJNA666695 86384 235 1.603093 3.76726855 Candidatus Culexmicrobium profundum 2928969 Archaea Archaea 87 2.23e-19   NR MCS7365591.1 2928969 g85290 i0 51.9 0.982978723404255 77 37 98.3 0 4 234 35 111 MCS7365591.1 AAA family ATPase [Candidatus Culexmicrobium profundum] diamond 231 87 1 Archaea   Thermoproteati Candidatus Culexarchaeota Candidatus Culexarchaeia Candidatus Culexarchaeles Candidatus Culexmicrobiaceae Candidatus Culexmicrobium Candidatus Culexmicrobium profundum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;