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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA665531" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA665531 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
629238 629238 PRJNA665531_P_NODE_11741_length_303_cov_1.634783_g11505_i0 PRJNA665531 11741 303 1.634783 4.95339249 root 1 Root_unresolved Root_unresolved 187 1.0299999999999999e-52   NR WP_088467314.1 1386 g11505 i0 100 7.92079207920792 100 0 99 0 2 301 765 864 WP_088467314.1 MULTISPECIES: DNA polymerase I [Bacillus] diamond 2400 187 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus  
4990596 4990596 PRJNA665531_P_NODE_18464_length_245_cov_0.895349_g18228_i0 PRJNA665531 18464 245 0.895349 2.19360505 Anaerococcus 165779 Bacteria Bacteria 145 1.19e-39   NR WP_073997853.1 1745712 g18228 i0 86.4 4.95918367346939 81 11 99.2 0 245 3 13 93 WP_073997853.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB [Anaerococcus urinomassiliensis] diamond 1215 146 0.993150684931507 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus urinomassiliensis
7008144 7008144 PRJNA665531_P_NODE_6226_length_432_cov_2.267409_g5990_i0 PRJNA665531 6226 432 2.267409 9.79520688 Peptoniphilus catoniae 1660341 Bacteria Bacteria 280 2.32e-92   NR WP_138159856.1 1660341 g5990 i0 92.4 1 144 11 100 0 1 432 117 260 WP_138159856.1 glutaconate CoA-transferase subunit A [Peptoniphilus catoniae] diamond 432 280 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus catoniae
8815268 8815268 PRJNA665531_P_NODE_13447_length_282_cov_2.693780_g13211_i0 PRJNA665531 13447 282 2.69378 7.5964596 Anaerococcus sp. 1872515 Bacteria Bacteria 182 1.17e-56   NR MDU5535395.1 1872515 g13211 i0 100 0.98936170212766 93 0 98.9 0 280 2 17 109 MDU5535395.1 uracil phosphoribosyltransferase [Anaerococcus sp.] diamond 279 182 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus sp.
11365785 11365785 PRJNA665531_P_NODE_15049_length_267_cov_1.587629_g14813_i0 PRJNA665531 15049 267 1.587629 4.23896943 Peptoniphilus 162289 Bacteria Bacteria 183 7.369999999999999e-54   NR WP_071126511.1 162289 g14813 i0 100 3 89 0 100 0 267 1 70 158 WP_071126511.1 MULTISPECIES: V-type ATP synthase subunit B [Peptoniphilus] diamond 801 183 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus  
19756311 19756311 PRJNA665531_P_NODE_20216_length_227_cov_2.259740_g19980_i0 PRJNA665531 20216 227 2.25974 5.1296098 Aerococcaceae 186827 Bacteria Bacteria 127 5.23e-35   NR WP_092571530.1 89093 g19980 i0 86.7 3.9647577092511 75 10 99.1 0 226 2 116 190 WP_092571530.1 50S ribosomal protein L3 [Ignavigranum ruoffiae] diamond 900 128 0.9921875 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Ignavigranum Ignavigranum ruoffiae
27081447 27081447 PRJNA665531_P_NODE_17542_length_249_cov_0.875000_g17306_i0 PRJNA665531 17542 249 0.875 2.17875 Selenomonas massiliensis 2058293 Bacteria Bacteria 75.9 8.82e-14   NR WP_106626164.1 2058293 g17306 i0 56.1 0.987951807228916 82 29 90.4 1 23 247 582 663 WP_106626164.1 autotransporter outer membrane beta-barrel domain-containing protein [Selenomonas massiliensis] diamond 246 75.9 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas massiliensis
27144265 27144265 PRJNA665531_P_NODE_10102_length_328_cov_1.509804_g9866_i0 PRJNA665531 10102 328 1.509804 4.95215712 Fusicatenibacter saccharivorans 1150298 Bacteria Bacteria 68.6 8.74e-13   NR WP_349141584.1 1150298 g9866 i0 85.4 0.375 41 6 37.5 0 219 97 1 41 WP_349141584.1 hypothetical protein [Fusicatenibacter saccharivorans] diamond 123 68.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Fusicatenibacter Fusicatenibacter saccharivorans
27176083 27176083 PRJNA665531_P_NODE_10362_length_324_cov_0.988048_g10126_i0 PRJNA665531 10362 324 0.988048 3.20127552 Lachnospiraceae bacterium 1898203 Bacteria Bacteria 202 4.22e-63   NR RKW55326.1 1898203 g10126 i0 100 0.972222222222222 105 0 97.2 0 316 2 1 105 RKW55326.1 MAG: signal peptide protein, partial [Lachnospiraceae bacterium] diamond 315 202 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae   Lachnospiraceae bacterium
27302875 27302875 PRJNA665531_P_NODE_19123_length_242_cov_0.911243_g18887_i0 PRJNA665531 19123 242 0.911243 2.20520806 Vagococcus intermedius 2991418 Bacteria Bacteria 95.5 9.63e-21   NR WP_275468960.1 2991418 g18887 i0 52.5 1.98347107438017 80 38 99.2 0 242 3 68 147 WP_275468960.1 oligopeptide ABC transporter substrate-binding protein [Vagococcus intermedius] diamond 480 95.5 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Vagococcus Vagococcus intermedius
27334502 27334502 PRJNA665531_P_NODE_15583_length_262_cov_1.619048_g15347_i0 PRJNA665531 15583 262 1.619048 4.24190576 Mediterraneibacter glycyrrhizinilyticus 342942 Bacteria Bacteria 68.6 2.72e-11   NR WP_205130583.1 342942 g15347 i0 89.8 0.938931297709924 49 4 56.1 1 100 246 1 48 WP_205130583.1 SPFH domain-containing protein [Mediterraneibacter glycyrrhizinilyticus] diamond 246 68.6 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Mediterraneibacter Mediterraneibacter glycyrrhizinilyticus
27745113 27745113 PRJNA665531_P_NODE_10404_length_323_cov_1.496000_g10168_i0 PRJNA665531 10404 323 1.496 4.83208 Anaerococcus sp. 1872515 Bacteria Bacteria 205 2.33e-61   NR MDU5535370.1 1872515 g10168 i0 100 1.98761609907121 107 0 99.4 0 323 3 92 198 MDU5535370.1 excinuclease ABC subunit UvrC [Anaerococcus sp.] diamond 642 205 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus sp.
27871048 27871048 PRJNA665531_P_NODE_14025_length_276_cov_3.467980_g13789_i0 PRJNA665531 14025 276 3.46798 9.5716248 Peptoniphilus lacydonensis 1673725 Bacteria Bacteria 175 4.7700000000000003e-51   NR WP_288150201.1 1673725 g13789 i0 100 1.97826086956522 91 0 98.9 0 275 3 61 151 WP_288150201.1 CAMP factor family pore-forming toxin [Peptoniphilus lacydonensis] diamond 546 175 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus lacydonensis
28293626 28293626 PRJNA665531_P_NODE_13866_length_278_cov_2.048780_g13630_i0 PRJNA665531 13866 278 2.04878 5.6956084 Peptostreptococcus 1257 Bacteria Bacteria 201 1.4999999999999998e-62   NR MBF1058112.1 1262 g13630 i0 98.9 1.98561151079137 92 1 99.3 0 2 277 123 214 MBF1058112.1 alpha amylase C-terminal domain-containing protein [Peptostreptococcus sp.] diamond 552 201 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus Peptostreptococcus sp.
28407966 28407966 PRJNA665531_P_NODE_5686_length_456_cov_1.300261_g5450_i0 PRJNA665531 5686 456 1.3002609999999999 5.92919016 Anaerococcus murdochii 411577 Bacteria Bacteria 253 3.85e-82   NR WP_223418893.1 411577 g5450 i0 91.8 0.967105263157895 147 12 96.7 0 15 455 41 187 WP_223418893.1 PTS mannose/fructose/sorbose transporter subunit IIC [Anaerococcus murdochii] diamond 441 253 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus murdochii
29071168 29071168 PRJNA665531_P_NODE_9948_length_330_cov_2.945525_g9712_i0 PRJNA665531 9948 330 2.945525 9.7202325 Peptostreptococcus 1257 Bacteria Bacteria 206 4.35e-66   NR WP_293429066.1 1257 g9712 i0 95.3 0.972727272727273 107 5 97.3 0 323 3 1 107 WP_293429066.1 MULTISPECIES: thiol peroxidase [Peptostreptococcus] diamond 321 206 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus  
29229060 29229060 PRJNA665531_P_NODE_16669_length_253_cov_1.650000_g16433_i0 PRJNA665531 16669 253 1.65 4.1745 Neofamilia massiliensis 1673724 Bacteria Bacteria 113 3.8599999999999998e-28   NR WP_054251600.1 1673724 g16433 i0 69.9 0.984189723320158 83 25 98.4 0 251 3 202 284 WP_054251600.1 DNA-directed RNA polymerase subunit alpha [Neofamilia massiliensis] diamond 249 113 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales   Neofamilia (nom. nud.) Neofamilia massiliensis
29449605 29449605 PRJNA665531_P_NODE_18110_length_246_cov_1.855491_g17874_i0 PRJNA665531 18110 246 1.855491 4.56450786 Gemella haemolysans 1379 Bacteria Bacteria 97.8 1.5e-21   NR MDU8070785.1 1379 g17874 i0 92.2 1.24390243902439 51 4 62.2 0 246 94 40 90 MDU8070785.1 hypothetical protein [Gemella haemolysans] diamond 306 97.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans
29702067 29702067 PRJNA665531_P_NODE_9990_length_330_cov_1.198444_g9754_i0 PRJNA665531 9990 330 1.198444 3.9548652 Kallipyga massiliensis 1472764 Bacteria Bacteria 209 5.29e-63   NR WP_019133430.1 1472764 g9754 i0 98.2 0.990909090909091 109 2 99.1 0 329 3 244 352 WP_019133430.1 Na+/H+ antiporter NhaC [Kallipyga massiliensis] diamond 327 209 1 Bacteria   Bacillati Bacillota Tissierellia     Kallipyga Kallipyga massiliensis
29860294 29860294 PRJNA665531_P_NODE_18831_length_243_cov_0.952941_g18595_i0 PRJNA665531 18831 243 0.952941 2.31564663 uncultured Anaerococcus sp. 293428 Bacteria Bacteria 130 7.409999999999999e-37   NR WP_297281999.1 293428 g18595 i0 79.7 0.975308641975309 79 16 97.5 0 238 2 30 108 WP_297281999.1 ferritin-like domain-containing protein [uncultured Anaerococcus sp.] diamond 237 130 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus uncultured Anaerococcus sp.
29892105 29892105 PRJNA665531_P_NODE_3811_length_575_cov_1.928287_g3578_i0 PRJNA665531 3811 575 1.928287 11.08765025 Kallipyga gabonensis 1686287 Bacteria Bacteria 330 4.759999999999999e-101   NR WP_053942662.1 1686287 g3578 i0 82.2 1.99304347826087 191 34 99.7 0 1 573 652 842 WP_053942662.1 InlB B-repeat-containing protein [Kallipyga gabonensis] diamond 1146 330 1 Bacteria   Bacillati Bacillota Tissierellia     Kallipyga Kallipyga gabonensis
30681553 30681553 PRJNA665531_P_NODE_6713_length_414_cov_1.571848_g6477_i0 PRJNA665531 6713 414 1.571848 6.50745072 uncultured Peptostreptococcus sp. 169971 Bacteria Bacteria 236 1.49e-75   NR WP_314515758.1 169971 g6477 i0 99.2 0.891304347826087 123 1 89.1 0 1 369 150 272 WP_314515758.1 sugar-binding transcriptional regulator, partial [uncultured Peptostreptococcus sp.] diamond 369 236 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Peptostreptococcus uncultured Peptostreptococcus sp.
31440223 31440223 PRJNA665531_P_NODE_19076_length_242_cov_0.911243_g18840_i0 PRJNA665531 19076 242 0.911243 2.20520806 Vagococcus allomyrinae 2794353 Bacteria Bacteria 77 5.38e-16   NR WP_209530915.1 2794353 g18840 i0 67.3 1.92148760330579 52 17 64.5 0 158 3 1 52 WP_209530915.1 DUF1033 family protein [Vagococcus allomyrinae] diamond 465 77 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Enterococcaceae Vagococcus Vagococcus allomyrinae
31788051 31788051 PRJNA665531_P_NODE_19197_length_241_cov_2.809524_g18961_i0 PRJNA665531 19197 241 2.809524 6.77095284 Peptoniphilus rhinitidis 1175452 Bacteria Bacteria 158 5.7e-48   NR WP_316703864.1 1175452 g18961 i0 100 0.995850622406639 80 0 99.6 0 1 240 6 85 WP_316703864.1 hypothetical protein [Peptoniphilus rhinitidis] diamond 240 158 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus rhinitidis
31914759 31914759 PRJNA665531_P_NODE_17137_length_250_cov_2.084746_g16901_i0 PRJNA665531 17137 250 2.084746 5.211865 Anaerococcus sp. 1872515 Bacteria Bacteria 162 4.58e-48   NR MDU5535036.1 1872515 g16901 i0 100 0.996 83 0 99.6 0 249 1 126 208 MDU5535036.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha [Anaerococcus sp.] diamond 249 162 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus sp.
32168128 32168128 PRJNA665531_P_NODE_15198_length_266_cov_1.098446_g14962_i0 PRJNA665531 15198 266 1.098446 2.92186636 Anaerococcus sp. WGS1529 3366812 Bacteria Bacteria 75.1 2.09e-13   NR WP_394012210.1 3366812 g14962 i0 50 0.879699248120301 78 38 88 1 237 4 1304 1380 WP_394012210.1 SpaA isopeptide-forming pilin-related protein [Anaerococcus sp. WGS1529] diamond 234 75.1 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Anaerococcus Anaerococcus sp. WGS1529
32263109 32263109 PRJNA665531_P_NODE_19398_length_240_cov_8.119760_g19162_i0 PRJNA665531 19398 240 8.11976 19.487424 Clostridium sp. 1506 Bacteria Bacteria 143 1.41e-39   NR WP_287597636.1 1506 g19162 i0 94.5 0.9125 73 4 91.3 0 21 239 29 101 WP_287597636.1 glycosyltransferase family 2 protein [Clostridium sp.] diamond 219 143 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sp.
32579377 32579377 PRJNA665531_P_NODE_9959_length_330_cov_2.046693_g9723_i0 PRJNA665531 9959 330 2.046693 6.7540869 Paraclostridium sordellii 1505 Bacteria Bacteria 112 5.42e-28   NR WP_270504437.1 1505 g9723 i0 56.1 0.972727272727273 107 44 97.3 1 9 329 89 192 WP_270504437.1 hypothetical protein [Paraclostridium sordellii] diamond 321 112 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Peptostreptococcaceae Paraclostridium Paraclostridium sordellii
32610647 32610647 PRJNA665531_P_NODE_11560_length_305_cov_3.728448_g11324_i0 PRJNA665531 11560 305 3.728448 11.3717664 Peptoniphilus rhinitidis 1175452 Bacteria Bacteria 207 1.5899999999999998e-66   NR WP_316714893.1 1175452 g11324 i0 100 0.99344262295082 101 0 99.3 0 304 2 17 117 WP_316714893.1 transcription termination/antitermination protein NusG, partial [Peptoniphilus rhinitidis] diamond 303 207 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus rhinitidis
32641873 32641873 PRJNA665531_P_NODE_11100_length_312_cov_2.171548_g10864_i0 PRJNA665531 11100 312 2.171548 6.77522976 Peptoniphilus gorbachii 411567 Bacteria Bacteria 206 8.6e-66   NR WP_205051841.1 411567 g10864 i0 99 0.990384615384615 103 1 99 0 311 3 64 166 WP_205051841.1 hypoxanthine phosphoribosyltransferase [Peptoniphilus gorbachii] diamond 309 206 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus Peptoniphilus gorbachii
32673475 32673475 PRJNA665531_P_NODE_9360_length_342_cov_2.405204_g9124_i0 PRJNA665531 9360 342 2.405204 8.22579768 Peptoniphilus 162289 Bacteria Bacteria 165 2.07e-50   NR WP_010246172.1 162289 g9124 i0 90.3 0.903508771929825 103 10 90.4 0 309 1 2 104 WP_010246172.1 MULTISPECIES: phage holin family protein [Peptoniphilus] diamond 309 165 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Peptoniphilaceae Peptoniphilus  
32768038 32768038 PRJNA665531_P_NODE_19280_length_241_cov_1.375000_g19044_i0 PRJNA665531 19280 241 1.375 3.31375 Veillonella sp. 3627 2490953 Bacteria Bacteria 149 7.23e-40   NR WP_127061587.1 2490953 g19044 i0 100 0.995850622406639 80 0 99.6 0 1 240 177 256 WP_127061587.1 elongation factor G [Veillonella sp. 3627] diamond 240 149 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella Veillonella sp. 3627

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;