RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA665531" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 9 ✖

bioproject 1

  • PRJNA665531 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7007967 7007967 PRJNA665531_P_NODE_17406_length_249_cov_1.681818_g17170_i0 PRJNA665531 17406 249 1.681818 4.18772682 Truepera radiovictrix 332249 Bacteria Bacteria 120 1.22e-29   NR WP_148221269.1 332249 g17170 i0 74.7 1 83 20 98.8 1 3 248 354 436 WP_148221269.1 N-acetylmuramoyl-L-alanine amidase family protein [Truepera radiovictrix] diamond 249 120 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
10833489 10833489 PRJNA665531_P_NODE_18629_length_244_cov_0.900585_g18393_i0 PRJNA665531 18629 244 0.900585 2.1974274 uncultured Truepera sp. 543023 Bacteria Bacteria 137 6.45e-36   NR CAA9560764.1 543023 g18393 i0 88.8 0.983606557377049 80 9 98.4 0 3 242 199 278 CAA9560764.1 MAG: D-3-phosphoglycerate dehydrogenase [uncultured Truepera sp.] diamond 240 137 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
26828461 26828461 PRJNA665531_P_NODE_17541_length_249_cov_0.875000_g17305_i0 PRJNA665531 17541 249 0.875 2.17875 Truepera radiovictrix 332249 Bacteria Bacteria 129 5.86e-34   NR WP_013178476.1 332249 g17305 i0 81.5 0.975903614457831 81 15 97.6 0 2 244 163 243 WP_013178476.1 alpha-E domain-containing protein [Truepera radiovictrix] diamond 243 129 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
26860309 26860309 PRJNA665531_P_NODE_18221_length_246_cov_0.890173_g17985_i0 PRJNA665531 18221 246 0.890173 2.18982558 Truepera radiovictrix 332249 Bacteria Bacteria 79 1.06e-15   NR WP_013178902.1 332249 g17985 i0 62.9 0.75609756097561 62 23 75.6 0 55 240 3 64 WP_013178902.1 HAD family hydrolase [Truepera radiovictrix] diamond 186 79 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
27555200 27555200 PRJNA665531_P_NODE_17044_length_251_cov_0.865169_g16808_i0 PRJNA665531 17044 251 0.865169 2.17157419 Deinococcota bacterium 1913990 Bacteria Bacteria 105 1.75e-24   NR MEM7736472.1 1913990 g16808 i0 57.8 1.9840637450199201 83 35 99.2 0 250 2 365 447 MEM7736472.1 FAD-binding oxidoreductase [Deinococcota bacterium] diamond 498 105 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
28344723 28344723 PRJNA665531_P_NODE_16186_length_257_cov_1.396739_g15950_i0 PRJNA665531 16186 257 1.396739 3.58961923 Meiothermus sp. 1955249 Bacteria Bacteria 128 1.19e-34   NR MDX2008499.1 1955249 g15950 i0 75.3 1.98443579766537 85 21 99.2 0 3 257 105 189 MDX2008499.1 ferric reductase-like transmembrane domain-containing protein [Meiothermus sp.] diamond 510 128 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus sp.
31978012 31978012 PRJNA665531_P_NODE_18898_length_243_cov_0.905882_g18662_i0 PRJNA665531 18898 243 0.905882 2.20129326 Truepera radiovictrix 332249 Bacteria Bacteria 47 0.00112   NR WP_013178521.1 332249 g18662 i0 56.4 0.962962962962963 39 17 48.1 0 2 118 294 332 WP_013178521.1 nitrilase-related carbon-nitrogen hydrolase [Truepera radiovictrix] diamond 234 47 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
32326504 32326504 PRJNA665531_P_NODE_17039_length_251_cov_0.865169_g16803_i0 PRJNA665531 17039 251 0.865169 2.17157419 uncultured Truepera sp. 543023 Bacteria Bacteria 94 1.3e-20   NR CAA9579596.1 543023 g16803 i0 62.1 1.0398406374502 87 28 99.2 2 1 249 224 309 CAA9579596.1 MAG: Glycine betaine/L-proline transport ATP-binding protein ProV [uncultured Truepera sp.] diamond 261 94 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
32831114 32831114 PRJNA665531_P_NODE_17260_length_250_cov_0.870056_g17024_i0 PRJNA665531 17260 250 0.870056 2.17514 Trueperaceae bacterium 2026798 Bacteria Bacteria 119 3.6e-30   NR HEX7021279.1 2026798 g17024 i0 69.5 2.976 82 25 98.4 0 1 246 124 205 HEX7021279.1 cysteine desulfurase family protein [Trueperaceae bacterium] diamond 744 119 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;