RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA665531" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA665531 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27682066 27682066 PRJNA665531_P_NODE_11804_length_302_cov_1.781659_g11568_i0 PRJNA665531 11804 302 1.781659 5.38061018 Caudoviricetes sp. 2832643 Viruses Viruses 70.5 1.34e-11   NR DAV36670.1 2832643 g11568 i0 45.8 0.824503311258278 83 44 82.5 1 295 47 613 694 DAV36670.1 MAG TPA: Membrane carboxypeptidase (penicillin-binding protein) [Caudoviricetes sp.] diamond 249 70.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31282065 31282065 PRJNA665531_P_NODE_17975_length_247_cov_0.885057_g17739_i0 PRJNA665531 17975 247 0.885057 2.18609079 Arthrobacter phage Mudcat 1796997 Viruses Viruses 103 5.42e-24   NR YP_009300699.1 1796997 g17739 i0 67.6 0.862348178137652 71 23 86.2 0 246 34 327 397 YP_009300699.1 portal protein [Arthrobacter phage Mudcat] diamond 213 103 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Mudcatvirus Mudcatvirus mudcat
31978013 31978013 PRJNA665531_P_NODE_20098_length_228_cov_5.367742_g19862_i0 PRJNA665531 20098 228 5.367742 12.23845176 Ackermannviridae sp. 2831612 Viruses Viruses 114 2.6500000000000004e-27   NR DAO36200.1 2831612 g19862 i0 76.5 0.894736842105263 68 16 89.5 0 24 227 350 417 DAO36200.1 MAG TPA: tail sheath protein [Ackermannviridae sp.] diamond 204 114 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Ackermannviridae   Ackermannviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;