RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA665531" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA665531 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29638955 29638955 PRJNA665531_P_NODE_15170_length_266_cov_1.569948_g14934_i0 PRJNA665531 15170 266 1.569948 4.17606168 Halovenus salina 1510225 Archaea Archaea 74.7 2.75e-13   NR WP_267163144.1 1510225 g14934 i0 54.7 5.92105263157895 75 33 84.6 1 236 12 36 109 WP_267163144.1 cupredoxin domain-containing protein [Halovenus salina] diamond 1575 74.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halovenus Halovenus salina
32243690 32243690 PRJNA665531_P_NODE_17558_length_249_cov_0.875000_g17322_i0 PRJNA665531 17558 249 0.875 2.17875 Halalkalicoccus 332246 Archaea Archaea 147 2.38e-39   NR WP_340603681.1 175632 g17322 i0 87.7 4.8433734939759 81 10 97.6 0 243 1 385 465 WP_340603681.1 aldehyde ferredoxin oxidoreductase family protein [Halalkalicoccus tibetensis] diamond 1206 147 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;