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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA664479" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA664479 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26682016 26682016 PRJNA664479_S_NODE_16841_length_164_cov_0.869565_g16765_i0 PRJNA664479 16841 164 0.869565 1.4260866 root 1 Root_unresolved Root_unresolved 75.5 2.19e-15   NR WP_151874162.1 817 g16765 i0 75.9 94.5548780487805 54 13 98.8 0 164 3 92 145 WP_151874162.1 30S ribosomal protein S4, partial [Bacteroides fragilis] diamond 15507 75.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides fragilis
27271100 27271100 PRJNA664479_S_NODE_17963_length_162_cov_0.902655_g17887_i0 PRJNA664479 17963 162 0.902655 1.4623011 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 83.6 2.91e-18   NR HUQ97798.1 1869212 g17887 i0 79.2 1.96296296296296 53 10 98.1 1 161 3 18 69 HUQ97798.1 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase [Chitinophagaceae bacterium] diamond 318 83.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
27745111 27745111 PRJNA664479_S_NODE_15724_length_165_cov_0.879310_g15648_i0 PRJNA664479 15724 165 0.87931 1.4508615 Cloacibacterium rupense 517423 Bacteria Bacteria 108 6.12e-26   NR WP_188618631.1 517423 g15648 i0 92.6 0.981818181818182 54 4 98.2 0 2 163 154 207 WP_188618631.1 ATP-dependent helicase [Cloacibacterium rupense] diamond 162 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Cloacibacterium Cloacibacterium rupense
27871046 27871046 PRJNA664479_S_NODE_14685_length_167_cov_0.864407_g14609_i0 PRJNA664479 14685 167 0.864407 1.44355969 Muribaculaceae bacterium 2498093 Bacteria Bacteria 84.3 2.7e-17   NR MBQ9216630.1 2498093 g14609 i0 76.4 1.97604790419162 55 13 98.8 0 3 167 400 454 MBQ9216630.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Muribaculaceae bacterium] diamond 330 84.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Muribaculaceae   Muribaculaceae bacterium
28313267 28313267 PRJNA664479_S_NODE_16686_length_164_cov_0.886957_g16610_i0 PRJNA664479 16686 164 0.886957 1.45460948 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 115 5.66e-29   NR WP_294820642.1 165435 g16610 i0 98.1 1.97560975609756 54 1 98.8 0 3 164 201 254 WP_294820642.1 aminopeptidase C [uncultured Flavobacterium sp.] diamond 324 115 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
28325227 28325227 PRJNA664479_S_NODE_3066_length_288_cov_4.447699_g2990_i0 PRJNA664479 3066 288 4.447699 12.80937312 Bacteroidia 200643 Bacteria Bacteria 44.7 0.0123   NR WP_025865170.1 314319 g2990 i0 61.5 2.97916666666667 26 10 27.1 0 18 95 294 319 WP_025865170.1 type I glyceraldehyde-3-phosphate dehydrogenase [Prolixibacter bellariivorans] diamond 858 45.1 0.991130820399113 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Marinilabiliales Prolixibacteraceae Prolixibacter Prolixibacter bellariivorans
29008123 29008123 PRJNA664479_S_NODE_18008_length_162_cov_0.902655_g17932_i0 PRJNA664479 18008 162 0.902655 1.4623011 Myroides sp. 1874736 Bacteria Bacteria 82.8 4.99e-17   NR MDO5637570.1 1874736 g17932 i0 79.2 2.92592592592593 53 11 98.1 0 2 160 172 224 MDO5637570.1 COX15/CtaA family protein [Myroides sp.] diamond 474 82.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Myroides Myroides sp.
30776674 30776674 PRJNA664479_S_NODE_15014_length_166_cov_0.871795_g14938_i0 PRJNA664479 15014 166 0.871795 1.4471797 Elizabethkingia anophelis 1117645 Bacteria Bacteria 108 6.41e-26   NR WP_407497252.1 1117645 g14938 i0 100 1.98795180722892 55 0 99.4 0 166 2 581 635 WP_407497252.1 Eco57I restriction-modification methylase domain-containing protein [Elizabethkingia anophelis] diamond 330 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Elizabethkingia Elizabethkingia anophelis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;