RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA663960" and tax_kingdom = "Heunggongvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJNA663960 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26650264 26650264 PRJNA663960_S_NODE_58541_length_161_cov_0.894737_g58305_i0 PRJNA663960 58541 161 0.894737 1.44052657 Viruses 10239 Viruses Viruses 58.5 5.73e-9   NR QAU04449.1 2508852 g58305 i0 47.2 2.96273291925466 53 28 98.8 0 159 1 68 120 QAU04449.1 anaerobic ribonucleoside-triphosphate reductase activating protein [Vibrio phage Va1] diamond 477 58.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage Va1
28123758 28123758 PRJNA663960_S_NODE_44985_length_181_cov_1.902985_g44749_i0 PRJNA663960 44985 181 1.902985 3.44440285 Pseudomonas phage Astolliot 2928830 Viruses Viruses 42 0.00413   NR UOL48816.1 2928830 g44749 i0 44.7 0.779005524861878 47 25 77.9 1 2 142 10 55 UOL48816.1 hypothetical protein [Pseudomonas phage Astolliot] diamond 141 42 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Vandenendeviridae Otagovirus Pseudomonas phage Astolliot

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;