RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA662254" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA662254 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29229021 29229021 PRJNA662254_P_NODE_489_length_2268_cov_3.131663_g378_i0 PRJNA662254 489 2268 3.131663 71.02611684 Zebrafish influenza B-like virus RQ01 Viruses Viruses 1383 0   NR 6T0W_C RQ01 g378 i0 90.3 0.992063492063492 750 73 99.2 0 2251 2 10 759 6T0W_C Chain C, Polymerase PB2 [Influenza B virus] diamond 2250 1383 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Betainfluenzavirus Zebrafish influenza B-like virus
29260134 29260134 PRJNA662254_P_NODE_1289_length_1542_cov_29.628999_g1023_i0 PRJNA662254 1289 1542 29.628999 456.87916458 Zebrafish influenza B-like virus RQ01 Viruses Viruses 576 1.6099999999999998e-200   NR AVM87625.1 RQ01 g1023 i0 64 0.918287937743191 472 165 90.9 3 1482 82 1 472 AVM87625.1 NA [Wuhan spiny eel influenza virus] diamond 1416 576 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus
30555197 30555197 PRJNA662254_P_NODE_873_length_1831_cov_40.051195_g685_i0 PRJNA662254 873 1831 40.051195 733.33738045 Zebrafish influenza B-like virus RQ01 Viruses Viruses 713 1.09e-251   NR AVM87624.1 RQ01 g685 i0 62.6 0.932277444019661 569 209 93.1 3 75 1778 3 568 AVM87624.1 hemagglutinin, partial [Wuhan spiny eel influenza virus] diamond 1707 713 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae   Zebrafish influenza B-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;