RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA662254" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA662254 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27492306 27492306 PRJNA662254_P_NODE_55623_length_246_cov_0.890173_g54972_i0 PRJNA662254 55623 246 0.890173 2.18982558 endosymbiont DhMRE of Dentiscutata heterogama 1609546 Bacteria Bacteria 121 9.22e-30   NR WP_322632419.1 1609546 g54972 i0 76.3 1.95121951219512 80 19 97.6 0 242 3 501 580 WP_322632419.1 DEAD/DEAH box helicase family protein [endosymbiont DhMRE of Dentiscutata heterogama] diamond 480 121 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales     endosymbiont DhMRE of Dentiscutata heterogama
31186971 31186971 PRJNA662254_P_NODE_45275_length_251_cov_0.865169_g44624_i0 PRJNA662254 45275 251 0.865169 2.17157419 Mycoplasmataceae bacterium 2685873 Bacteria Bacteria 94.7 4.84e-21   NR MDR0985863.1 2685873 g44624 i0 53 3.94422310756972 83 39 99.2 0 249 1 56 138 MDR0985863.1 phosphate acyltransferase PlsX [Mycoplasmataceae bacterium] diamond 990 94.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae   Mycoplasmataceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;